KEGG   Spodoptera litura (tobacco cutworm): 111352022
Entry
111352022         CDS       T08157                                 
Name
(RefSeq) pre-mRNA-processing factor 19
  KO
K10599  pre-mRNA-processing factor 19 [EC:2.3.2.27]
Organism
sliu  Spodoptera litura (tobacco cutworm)
Pathway
sliu03040  Spliceosome
sliu04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:sliu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111352022
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    111352022
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sliu03041]
    111352022
   04121 Ubiquitin system [BR:sliu04121]
    111352022
   03400 DNA repair and recombination proteins [BR:sliu03400]
    111352022
Enzymes [BR:sliu01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     111352022
Spliceosome [BR:sliu03041]
 Complex B
  Other components
   Prp19 complex
    111352022
 Complex C
   Prp19-CDC5 complex
    111352022
Ubiquitin system [BR:sliu04121]
 Ubiquitin ligases (E3)
  U-box type E3
   111352022
DNA repair and recombination proteins [BR:sliu03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    111352022
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Prp19 Beta-prop_EML_2 WDR55 Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C ANAPC4_WD40 Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_Vps41 WDR90_beta-prop_4th Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_HPS5 Beta-prop_SCAP Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_IFT122_1st Beta-prop_RIG_2nd U-box eIF2A Beta-prop_DCAF4 Beta-prop_DCAF12 B-prop_COPA_B_2nd WD40_like Cytochrom_D1 Beta-prop_WDR35_TULP_N PROPPIN WDR54 RMC1_N PAS_11 zf-Nse
Other DBs
NCBI-GeneID: 111352022
NCBI-ProteinID: XP_022820083
UniProt: A0A9J7DX00
LinkDB
Position
14:1012770..1016677
AA seq 500 aa
MALYCAISNEVPEQPVVSPSSGAVFEKRVIEKYIIENGVDPINGKELRVEDLIEIKTPPI
VKPKPPSATSIPATLKSMQDEWDALMLHAFTQRQQLQTARQELSHALYQHDAACRVIARL
TKEVTAAREALATLKPQAGIVAPQPTHQAEAGAAGGGGVAPVGMSSEVVSRLQERATALT
QERKRRGRTVPEGLLAPDQIRAFLTLASHPGLHSASVPGILALDINPSDHSKLLTGGNDR
NATVFNKDTEQVVAILKGHTKKVTRVIYHPDEDTVITASPDHTIRVWNVPTSQTTVILRS
HDGPVTGLSLHPTGDYVLSTSTDQHWAFSDIRTGTLLTKVSDFSGVSLTTAQFHPDGLIF
GTGTENSQVKIWDLKEQSNVANFPGHVGPVTSISFSENGYYLATAAEDACVKLWDLRKLK
NFKTIQLEEGYAIKELCFDQSGTYLAIAGTDVRVYLCRQWQELKVFNDHTASATGVRFGK
NAQYIASTSMDRTLKLYGIE
NT seq 1503 nt   +upstreamnt  +downstreamnt
atggctctgtattgtgcaatatctaatgaggtccctgaacaacctgtggtgtctccatcc
tcgggagccgtgtttgagaagcgtgtcatagagaagtatataatagaaaatggagtggac
cctattaatggcaaggaactgcgagttgaagatcttattgagattaaaactccaccaata
gtgaaaccaaagcctccaagtgccacgtctatccccgctaccttgaagagtatgcaggat
gagtgggatgctctcatgctgcatgccttcactcagcgccaacagctgcaaactgctcga
caggaattaagtcacgctctctaccaacacgatgctgcgtgccgtgtgatcgcccgtcta
accaaggaagtgacggccgcgagagaagccctcgcaacgctcaaaccacaggctggcatt
gtagctccccagccaactcaccaggcggaagctggtgctgcaggcggcggtggcgtggcc
ccggtggggatgtccagcgaggtggtgtcgcgtctgcaggagcgtgccaccgcgctcaca
caggagcgcaagcgacgcggccgcaccgtgcccgagggactgctcgcgcctgaccagata
cgagctttcctcaccttggcatcacatcccggtctccactcagccagtgtgcctggtatc
ttggctttggacatcaacccatcagatcacagcaaactgctaactggtggtaatgacagg
aatgctactgtgtttaataaagacactgagcaagtggtggccatcctcaagggtcacacc
aagaaggtcacccgcgtcatctatcatccagatgaggatactgttatcactgcctcacca
gatcacactattcgtgtatggaatgtgcctacgtctcaaactacagtgatcctgcggtcc
cacgatggacctgtgactggcttgtccctccaccccactggcgactacgtcctgtcgaca
tctaccgaccagcactgggccttctccgacatccgcacaggcacgctgctcactaaggtc
agcgatttctctggtgtcagccttaccacggcgcagtttcaccctgacggtctgattttt
ggtactggtacagagaattctcaagttaagatttgggacttgaaagagcagagcaatgtg
gctaacttccctggacacgtgggaccagtgacatccatctccttctcggagaacggttat
tatcttgctacagcagctgaagacgcgtgtgttaagttgtgggatttgagaaagcttaaa
aacttcaagactattcaactagaagaagggtatgccatcaaggagttgtgctttgaccag
agtggtacttacctggctattgctggtacagacgttagggtatacctgtgcagacagtgg
caggagttgaaggtgtttaatgaccacactgcatccgccacgggcgtcaggttcggtaag
aacgcgcagtacatcgcgtctactagcatggataggacactcaaattgtatgggatagag
tag

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