Spodoptera litura (tobacco cutworm): 111352062
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Entry
111352062 CDS
T08157
Name
(RefSeq) pre-piRNA 3'-exonuclease trimmer-like
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111352062
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sliu03019
]
111352062
Enzymes [BR:
sliu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
111352062
Messenger RNA biogenesis [BR:
sliu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111352062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
111352062
NCBI-ProteinID:
XP_022820149
UniProt:
A0A9J7E2M5
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Position
14:11658154..11671410
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AA seq
525 aa
AA seq
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MEVTSENFDEEFDNFKIDLKNACFVSFDAEFNALLSGDKFKHRLFDTNEERYNLIKNDVD
QLIMTQVGLTMFEYHRDRDRYIAKSYTFYLCPQSFSEIDQSFVFLASTLKFLRRHHFDFN
KFIYGGVPYLSKAEETVVRQNLKENTLFNQLTRTLQMDDEKLLQDYCSEVSKWLIRSNDD
TMYLNVPNHILRYVTHMEVRMRFPSVVTTNSLGDSKKILIYRNVNVEGAISTPREELENN
LLDGLLGFSRVIALLAESQKPIAGHNLFIDTIILHNQFIGPLPNKYKDFKKNVHNMFPIL
YDTKYLSSIMAKKLPHNGCWKSNALQDLYEFFAERKFMKLHMWANDIELRKPFASNQTYH
EAGWDSYCTGFCFIRLAHWVACENRGNFANVGPTEKLKVLKPYCNKVNVIRGAVQYMNFA
EDDPPRFRPQLLHLMLLKENSINVGKVASELGAYGSIDIKPYGNKAALIATGSQQVAQKI
LKEFRNSKEYKIALYSHSPAKRVALWSGALITGSIVLYLLHQKLR
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atggaagtaacaagcgagaatttcgacgaagaatttgacaactttaaaattgatttgaag
aatgcttgttttgtctcctttgacgcggagttcaacgcgcttttatctggggataagttt
aaacatagattatttgatactaatgaagaaaggtataacttgatcaagaatgatgtagat
cagttaataatgacacaagtaggtttgactatgttcgaatatcacagggatcgtgacagg
tacatagccaaatcttatacattttatttgtgtccacaatccttttcggaaatcgatcag
agcttcgtttttctagcctccacactgaagttcttacgcagacaccatttcgattttaat
aagttcatatatggaggagtgccatacttgagcaaagctgaggaaactgtagtaagacaa
aatttaaaagaaaacacattatttaatcagctgacaaggacgctgcagatggatgatgag
aaactgttgcaagactactgctcggaagtttctaagtggctaataagaagcaatgatgac
accatgtacctaaatgtcccaaatcatatacttcgttatgttacacatatggaagttaga
atgcgtttcccaagcgtagtcaccacaaatagcttaggtgatagtaagaagatcctaata
taccgaaatgtaaatgtagagggggccatcagcactccgagagaagaacttgaaaataat
ctattggacggtttgctcgggttttcaagagtcatagcacttttagcggaatcacagaaa
cctatagctggacacaatttatttatagacaccatcatactccataatcagttcatagga
cctctaccgaacaaatacaaggactttaagaagaacgttcacaatatgttcccaatatta
tatgacacaaaatatttatctagcattatggcgaagaagctcccgcacaatggctgttgg
aagtcgaacgcattacaagacctttacgagttcttcgcggaaaggaaattcatgaaattg
cacatgtgggccaatgacattgagctgagaaagccttttgcttctaaccaaacataccat
gaagcagggtgggactcgtactgtacaggattctgtttcatccggctggctcattgggtg
gcgtgtgagaatcgaggcaacttcgccaatgtaggacccacggaaaaattgaaggtgctc
aaaccgtactgcaacaaggtcaacgtcattcgtggagcggttcagtacatgaatttcgcg
gaagacgatccgccacgctttcgtcctcagctgttgcatttgatgttactgaaggaaaac
tccatcaatgtcggcaaggtggcgtccgagctgggagcctacgggtcgattgatatcaag
ccttatgggaacaaagctgccctaatagccaccggcagtcaacaagtcgcccaaaaaata
ttgaaggagttcaggaacagtaaagagtacaagatagcactgtacagtcactcgccagct
aagagagtggccctttggagcggcgctttaatcaccgggagtatagtcctgtatcttcta
caccagaagttaagataa
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