KEGG   Spodoptera litura (tobacco cutworm): 111352946
Entry
111352946         CDS       T08157                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB9
  KO
K03017  DNA-directed RNA polymerase II subunit RPB9
Organism
sliu  Spodoptera litura (tobacco cutworm)
Pathway
sliu03020  RNA polymerase
sliu03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sliu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    111352946
  09124 Replication and repair
   03420 Nucleotide excision repair
    111352946
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sliu03021]
    111352946
   03400 DNA repair and recombination proteins [BR:sliu03400]
    111352946
Transcription machinery [BR:sliu03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     111352946
DNA repair and recombination proteins [BR:sliu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      111352946
SSDB
Motif
Pfam: Zn_ribbon_TFIIS Zn_ribbon_RPB9 Zn_Ribbon_TF Zn_ribbon_recom RIM2a_ZnF Zn_ribbon_IS1595 DUF7351 HVO_0758 DZR SR1P
Other DBs
NCBI-GeneID: 111352946
NCBI-ProteinID: XP_022821440
UniProt: A0A9J7DZ90
LinkDB
Position
2:complement(499560..500149)
AA seq 126 aa
MTLNLGRKDGGPGYVGIQFCQECNNMLYPREDKNNKVLLYACRNCDYKQLADSNCVYVNK
IMHEVDELTHINPDVVSDPTLPRTKDHMCPNCNHREAVFFQGQTRRAEEEMRLYYVCTSC
KHRWTE
NT seq 381 nt   +upstreamnt  +downstreamnt
atgacattaaacttgggaagaaaggacggcggtcccggatacgtcggtatacagttctgc
caagagtgtaacaacatgttatatccacgcgaggacaaaaacaacaaagttttgttgtat
gcctgtagaaactgcgactataaacaactggcggactcaaactgtgtatacgtgaacaaa
attatgcacgaagttgacgaattaacccatataaacccagatgtggtgagtgatcctact
ttgcctcgaacgaaagatcatatgtgcccgaattgcaaccacagagaggcggtgttcttt
cagggacaaactcgacgcgctgaagaagagatgagactatactacgtgtgcactagttgt
aagcacaggtggactgagtaa

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