Spodoptera litura (tobacco cutworm): 111353117
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Entry
111353117 CDS
T08157
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03013
Nucleocytoplasmic transport
sliu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
111353117
03015 mRNA surveillance pathway
111353117
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sliu03019
]
111353117
Messenger RNA biogenesis [BR:
sliu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
111353117
mRNA cycle factors
P-body specific factors
111353117
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
111353117
NCBI-ProteinID:
XP_022821755
UniProt:
A0A9J7DZU3
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Position
16:complement(11462545..11467257)
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AA seq
512 aa
AA seq
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MTEDQDAKDSQSDSGSKTFINKNKDKKTKTQRPLTKIILRRLPPTMTEEAFLEQVSPIPE
HDHFYFAKPDPSLGNNLYSRAYINFVNVDDIYLFRDKFDGYVFLDEKGVEYVGIVEYAPF
QRIPKKKKKKDPKCGTIESDPIYQDFVESLKKDPETENQPKLEYSYPVNDSNDKKVQSTP
LLEYLAARKQDKRGRDERRRRENDKRKMRIERKTKDSIKEEETAEGEVKKIKSREWEKEK
ASDARDDQVKSDGKDGSVFESKSYRDQRKTGATVVSDKKKKPDSDKRDARDDDQVEDDDM
GYKKDKRENTKFSKESPREVKSKKYSDTRKERIKQTEVGKSDKQSAINKIMSSDNKVKSI
NHDDIKPFTQLPHVKTDDLTKIIEGMDKKVKLSDSSKESNDDSISKSSPVGVSKMRRNSL
ESGEMPVKDDLVLKRQNSLDDRSKSTDREGSEEKEKSESGDRRTERRIRNKDRPSLVIYQ
PGMGKFSKQRLAKEKDTPPPAKSINDSEKKDT
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagatcaagatgcaaaagattcgcagtcagattcgggcagtaaaacctttatt
aataagaacaaggacaagaaaacaaaaacccaacggccgctgaccaaaattatacttcgg
cggttaccgcctactatgactgaggaggcgtttttggagcaggtttcgccgatacctgaa
catgaccatttctattttgctaagccagacccttcgcttggcaataacctatattccaga
gcttacataaacttcgttaatgttgacgatatttacttatttagagataaattcgatgga
tatgtatttctagatgaaaaaggtgtagagtatgtgggtatagtggagtatgccccgttc
caaagaatacccaagaaaaaaaagaagaaagaccccaaatgtggtaccatagagagtgac
cccatctatcaagactttgttgaaagtctcaaaaaagatcctgagactgaaaatcaacca
aaacttgaatattcatatcctgttaatgattccaatgacaagaaagtacaatccactcca
ttgctggaataccttgctgcgaggaagcaggataagcgaggaagagatgagcgtcgcagg
agagagaatgacaagaggaaaatgaggatagaaaggaaaaccaaagactctattaaggag
gaagagactgcagaaggtgaagttaaaaagatcaaatccagagaatgggaaaaagaaaaa
gcaagtgatgccagggatgaccaggtgaagtctgatgggaaagatggatctgtatttgaa
tctaaatcatatagagaccagcgcaagactggtgctactgttgttagcgacaaaaagaaa
aaacctgattctgataaaagagacgccagagacgacgaccaggtcgaggacgacgacatg
ggatacaagaaagataaacgggagaatactaaattcagtaaggagtcaccccgcgaggtg
aagagtaaaaagtatagtgacactaggaaagagagaataaaacaaactgaagttgggaaa
tcagacaaacaatcagctataaacaaaatcatgtcttctgacaataaagttaagtctata
aatcatgacgacatcaaaccattcacacaactgccgcacgtaaagactgacgacttgact
aagatcatcgagggaatggacaagaaagtgaagctcagtgatagtagtaaggagtccaat
gatgactcaatctccaagagctcccctgtaggtgtgtcaaagatgaggaggaatagcttg
gagtctggggaaatgcctgtcaaagatgatttagttttgaaaaggcaaaattctctggac
gacagaagcaaatcaactgacagggagggttcggaggagaaggagaagagtgagagtggc
gatcgtcgtacggaaaggagaattaggaataaggatcgtccaagcctcgtgatctaccag
ccgggaatggggaagttcagcaagcagcgcctggccaaggagaaggacacgccgccgccc
gccaaaagtataaacgatagtgagaagaaagacacctga
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