Spodoptera litura (tobacco cutworm): 111353342
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Entry
111353342 CDS
T08157
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
sliu
Spodoptera litura (tobacco cutworm)
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
sliu01009
]
111353342
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sliu03019
]
111353342
04131 Membrane trafficking [BR:
sliu04131
]
111353342
03036 Chromosome and associated proteins [BR:
sliu03036
]
111353342
Enzymes [BR:
sliu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
111353342
Protein phosphatases and associated proteins [BR:
sliu01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
111353342
Messenger RNA biogenesis [BR:
sliu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
111353342
Membrane trafficking [BR:
sliu04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
111353342
Chromosome and associated proteins [BR:
sliu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
111353342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
zf-UBP_var
Motif
Other DBs
NCBI-GeneID:
111353342
NCBI-ProteinID:
XP_022822090
UniProt:
A0A9J7IR58
LinkDB
All DBs
Position
16:13840785..13861315
Genome browser
AA seq
1127 aa
AA seq
DB search
MSTPPPQQPRRSSGESKKAPPASSVVTRNGARKAKIQTRAMSAGAKPSASVIAAKRKAQQ
KKKHNFVIELRDHYQIAMDSKTKVKGATGLVTEPRMAEHRCLWDDQYPECPERLTSVIER
CHELNLIDECKQFPPRAATKEELCVLHAPSVYDLMETTHHNNDLQYLEGISAKYDAIYIH
PSTHELALLSAGSTIDLVDRIVSGEVQNGAALIRPPGHHAMRDEPCGYCFYNNVALAAKH
AIDKRGLKRILIVDWDVHHGQATQQMFYNDPRVVYFSIHRYEHGAFWPNLRQSNFNYVGS
GLGKGHNFNIPLNKTGMKDADYLAIWHQLLLPMALEYHPELIIISAGYDAAYGCPEGEME
VTPACYAHLTQALAAVCPRVCVVLEGGYCVTSLAEGAALTLRTLLGRAPPLLDDLTEPTD
EIKETILNCIYAQKPYWNCYNFQQTYSTSGPPNVCDEAKEKHTVVVRWEGDETRPDTFAT
RNCYPVQDDGFKKRIAERLNHLRLVTDLSAPQHAVGYIYDQAMLKHKNICEPGHVECPER
IMRIHERHRDFGLLDRVHQLTARQATDQEILAVHTEKHLNRLKELASTSLRSLHIQKNAY
DSVYFHPDSLESAAVATGCVLKMVESVLTNECGSGVCVVRPPGHHADEEIPSGFCLLNNA
AAAAKYAIDGHGLNRVLVLDWDVHHGNGTQRITYHDNRILYMSIHRYDNGLFFPHSKDAN
YTAVGAGKGEGYNVNVPWNSRGMGDVDYMTAFTQVILPIAYAYNPQLVIVSAGFDACVGD
PLGGCKVTPECYGRMTQLLRGLAGGRVVLCLEGGYNITSISYCMAMCTKALLGDPIYYHY
DPKTPCSWSAIDSIRDVIDTHKKYWKCLKFHVALPADSVLEPPLPSRGLIIDQDLEISAC
NEDMHNLSSKSSTSKLEMSLEASMVNLNIGKKCSDGIHCGTDDEDEQPKPSRSTDNPDAG
TSTDKTLAKDAPTSPGKRPLDEATKPEKKPTLVDYLAENMQSILDGEMFAVVPLAWCPHL
DSLYTLPEEVKFEQGVKCVDCDHTEENWVCLHCYITACARSVNGHMQAHFTATGHALVLS
LVDLSVWCNVCDAYVDNSLLYDAKNNAHRCKFGEDMPWCYKTDIHMQ
NT seq
3384 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccccaccgcctcagcagccgcggcgttcatcaggagagagtaaaaaggcaccg
cctgcgtctagcgttgtgaccagaaatggtgctcgcaaggccaagatacaaacgcgcgca
atgtccgcaggtgctaagccatcagcatctgtaattgctgcgaaacgaaaagcccaacag
aagaagaaacataattttgtgatcgaactcagagatcactatcaaattgccatggattct
aagactaaagtaaagggggcgacgggactcgtaacggaaccgcgtatggctgagcaccga
tgtctgtgggacgaccagtacccggagtgccccgagagactcactagcgttattgaaaga
tgccatgaactaaacctaatagatgaatgcaagcagttcccacctcgagcggcgaccaag
gaagagttgtgtgtgctgcacgcgccctctgtgtacgacttgatggaaactacgcaccac
aacaacgacctccagtacttggaggggatctccgccaaatatgacgccatctacatacac
ccatcgacccacgagctagccctgttatcagccgggtctacaatcgacctagtggaccgg
atagtgtccggggaagtacaaaacggcgcggcattgatccggccgcccggccaccatgcc
atgagggacgagccgtgtggatactgcttctataacaacgtcgctttagctgctaaacat
gccatcgataaacggggccttaaaaggatactaatagtggactgggatgtacatcacgga
caagccactcagcagatgttttacaatgaccccagagtcgtatacttctcaatccaccgc
tacgagcatggtgcattctggcccaacctgagacagtccaacttcaactacgtgggctcc
ggactgggcaagggacacaacttcaacatccccctcaacaaaactggcatgaaggatgct
gactacctcgccatatggcatcagttgctgctgcccatggctttggaataccacccggag
ctcatcataatatcagctggctacgacgcggcgtacggctgtcctgagggggaaatggag
gtaactccagcatgttacgcgcacctgacgcaggcgctggcggccgtgtgcccgcgcgtg
tgcgtggtgctggagggggggtactgcgtgacgtcactggccgagggcgcggcgctcacg
ctgcgcactctgctcggacgcgcgccgccactgctcgacgacctcacagagcccactgat
gaaataaaagaaacaatattaaactgtatatacgcacagaagccatattggaactgctac
aactttcaacagacgtactcaacgagcggcccgcccaatgtatgcgatgaagcgaaagag
aaacatacagttgtagtaaggtgggagggagacgaaactagacctgataccttcgctact
aggaactgttatcccgtacaagatgatggttttaagaagagaatcgctgaacggttgaac
catcttagattggtcactgatttgtcagcgccgcaacacgcagttggatatatttacgat
caagctatgctgaagcacaaaaatatttgcgaacctgggcacgtagaatgcccggaacga
ataatgcgcatacacgaacgtcatagagacttcggtcttttagaccgagtacatcaactt
actgccaggcaggcaacggaccaggagatattggctgtacatactgaaaaacatttaaac
agactaaaagagctggcctcgacgagtctaagaagtctccacatacaaaagaacgcgtac
gactccgtgtacttccaccctgactcactagagagcgctgccgtcgcgacgggctgcgtg
ctaaagatggtggagtcagtattaacaaacgagtgtggcagcggtgtgtgcgtggtccgc
ccgcccggccaccacgccgacgaggagatcccgagcggcttctgtctactcaacaacgcc
gcggccgccgccaagtacgcgatagacggccacggactcaacagggtgcttgtactggac
tgggacgtacatcacggaaatgggacgcaaagaattacctatcatgataataggatcctg
tacatgtcaatccatcgttacgacaacggtttgttcttccctcactcgaaggacgccaac
tacaccgccgtcggcgcggggaagggggaggggtataatgtcaatgtaccatggaactcg
cgcggtatgggcgacgtggactatatgacggcgttcacacaggtcatactgcccatagca
tacgcctacaacccacagctcgtcatcgtatccgccgggtttgatgcctgcgtcggggat
ccgcttggaggttgcaaagtgacccccgagtgctacggacgtatgacgcaactactgcgg
ggcctggcgggcggacgggtcgtcctttgtctggagggcgggtacaatatcaccagcatc
tcgtactgcatggccatgtgcaccaaggcgttactcggggaccccatctactaccactac
gaccccaagaccccgtgctcctggtccgccatcgactccatccgtgacgtcatcgacaca
cacaagaaatactggaagtgtcttaaatttcacgtcgcattgccagcagacagtgtccta
gaaccaccactgccatccagaggccttattatagaccaagatctagagatatcagcgtgc
aacgaagacatgcataacttgtcgtctaagtcaagcacaagtaaattagaaatgtcactg
gaagcgagcatggtaaacttaaatataggaaagaagtgttccgacggtatacactgcggt
acagatgacgaggatgaacagccgaagccatcacggagtactgacaaccctgacgctggt
actagcacagacaaaacactcgccaaagacgccccaactagtcctgggaaaaggcctcta
gatgaagccacgaaaccagagaaaaagccgactttagtcgattatttagccgagaacatg
caatcgatacttgacggtgagatgtttgcggtggtccccttggcatggtgtccacattta
gattcactgtacactttgcctgaagaagtaaagtttgaacaaggcgtcaagtgcgtagac
tgcgatcataccgaagagaattgggtgtgcttgcattgctatatcacggcctgcgcccgc
agtgtgaacgggcacatgcaagctcacttcacagccaccggccacgcgctagtgttgtcc
ttagtcgatttgtcagtgtggtgcaatgtttgcgacgcttacgttgataactcactactc
tatgacgctaagaataacgcgcataggtgcaagttcggggaggacatgccctggtgttat
aagactgatatacatatgcaatag
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integrated database retrieval system
