Spodoptera litura (tobacco cutworm): 111353573
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Entry
111353573 CDS
T08157
Name
(RefSeq) exosome complex component RRP42
KO
K12589
exosome complex component RRP42
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111353573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sliu03019
]
111353573
Messenger RNA biogenesis [BR:
sliu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111353573
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
111353573
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
111353573
NCBI-ProteinID:
XP_022822464
UniProt:
A0A9J7IQP0
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Position
16:complement(4876926..4879872)
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AA seq
310 aa
AA seq
DB search
MAGLLLSPTEKVFIVHGVQDDHRSDGRTNIDYRPMELETNVVSHATGSSRLRLANTDILV
GVKTEIDVPTPEKPDLGKIEFYVDCSANAAPQFEGRGGEQLAIGIAKLMQAAYHSSDAFD
LKQLCIFEGKQCWKIYVDILILECGGNLCDAVSMAVKAALFNTKLPSVKAALMDGGNIDL
QLSDDPYDAKSLDIGTAPLLVTLCKIGDKCVVDPSAEEESCSVISVVVGVTGNPSSYSTE
EIVSDSAKESKFTTIEMIGSGSVAPKTLKDAMNQGMVAAKLLDKALGEALLRERQETQVK
TKKHSYGFLR
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggctgggctcttgttaagcccgactgaaaaagtgtttatcgtgcacggtgttcaggat
gatcatcgctccgatggacgaaccaatattgattaccggccaatggaactagagacaaat
gtagtcagtcatgccactggatcatcgagactccgacttgcaaacacagatatacttgtt
ggagttaaaactgaaatagatgtcccaactccagaaaaacctgacttaggaaagattgaa
ttttatgttgattgctcagcaaatgcagcaccacagtttgaaggcagaggtggggaacaa
ttagctatagggattgccaaattaatgcaagctgcataccattcctcagatgcatttgat
ttgaaacaactttgtatatttgagggcaaacaatgctggaaaatctatgtcgatatattg
atattagaatgtggaggtaatctctgtgatgcagtgtctatggctgtgaaagctgcgctt
ttcaacacgaagttaccatcagtaaaggcagcacttatggatggagggaatatagacttg
cagttatctgatgacccttatgatgctaaatctttagacattggaacagcacctttacta
gtgacactatgtaaaattggtgacaaatgcgtagtagacccatcagcagaagaagaaagt
tgcagtgtcatatcagttgtagtaggggtcacgggaaaccccagcagctatagtactgaa
gaaattgtgtcagattctgctaaagaaagcaaattcaccacaatagaaatgatagggtct
ggtagtgttgcaccaaaaactttgaaagatgccatgaaccaaggaatggttgcagcaaag
ttacttgacaaagctttaggtgaagcattattacgagaaagacaagagacacaggtcaag
actaaaaagcattcatatggattcctaagataa
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integrated database retrieval system
