Spodoptera litura (tobacco cutworm): 111353680
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Entry
111353680 CDS
T08157
Name
(RefSeq) probable histone-binding protein Caf1 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03082
ATP-dependent chromatin remodeling
sliu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
111353680
03083 Polycomb repressive complex
111353680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sliu03036
]
111353680
Chromosome and associated proteins [BR:
sliu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
111353680
Histone modification proteins
HAT complexes
HATB complex
111353680
HDAC complexes
Sin3A-HDAC complex
111353680
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
111353680
PRC2.2
111353680
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
111353680
Heterochromatin formation proteins
Other heterochromatin formation proteins
111353680
Chromatin remodeling factors
NuRD complex
111353680
NuRF complex
111353680
NuRF complex (fruit fly)
111353680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
WDR55
WD40_WDHD1_1st
Beta-prop_EML
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_DCAF12
ANAPC4_WD40
WD_LRWD1
eIF2A
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
MIOS_WD40
PEP5_VPS11_N
NBCH_WD40
YqbF
Motif
Other DBs
NCBI-GeneID:
111353680
NCBI-ProteinID:
XP_022822544
UniProt:
A0A9J7E680
LinkDB
All DBs
Position
17:7817787..7825496
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AA seq
433 aa
AA seq
DB search
MGDKGDGETFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEG
KDYSVHRLILGTHTSDEQNHLLIASVQLPNEDAQFDASHYDNDKGEFGGFGSVSGKIDIE
IKINHEGEVNRARYMPQNPCVIATKTPSSDVLVFDYTKHPSKPEPSGECHPDLRLRGHQK
EGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEGRVIEAKSVFTGHTAVVEDVAWHLL
HESLFGSVADDQKLMIWDTRCNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTV
ALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRSRLHVWDLSKIGEEQTAE
DAEDGPPELLFIHGGHTAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEEPETP
ASELESGVNVNHG
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacaaaggtgacggagaaacctttgatgatgcggttgaagagagggtaatcaat
gaagagtataaaatatggaaaaagaacactccatttttgtacgatctggttatgacacac
gctctggagtggccctcgctaactgcccagtggctacctgacgtgacccggcctgaagga
aaggattattcggtacatagattaatcttgggtactcacacatcagatgaacagaatcac
ttgctgattgcaagtgtacagcttcccaatgaagatgcacagtttgatgcgagccactat
gacaatgataaaggtgaatttggtggcttcggatcagtgtcaggtaaaattgacattgag
atcaaaatcaaccatgagggtgaagtgaacagggctcggtacatgcctcagaacccctgt
gtgattgccaccaagactccttcctctgatgtgttggtctttgactacactaagcatcca
tcaaagcctgaaccttctggggaatgccatcctgatctcagattgcgtggtcaccaaaaa
gagggctatggtttatcctggaatccaaaccttaatggttatctgctgtcagcgagtgat
gaccatacaatatgtctttgggacattaacgcgacgccgaaggaaggtcgcgtcattgaa
gctaagtcggtgttcactggacacacggccgtggttgaggatgtcgcctggcatctcctg
cacgaatcactattcggatctgtggctgatgatcagaaacttatgatttgggatactaga
tgtaacaacacatcaaagccctctcacacagtagacgcgcatactgctgaagtcaactgt
ctcagcttcaatccctactctgaattcattctagctacaggcagtgctgataaaacggta
gcgctgtgggacctccggaacctgaagctgaagctgcactcatttgagtcacacaaggac
gagatcttccaagtccagtggtcgccgcataacgagaccatccttgccagcagtggtacc
gacagaagcaggcttcacgtgtgggatctgtcgaagataggcgaggagcagacggccgaa
gacgcggaggatggtcctcctgagttattgttcatccacggtggacatacagctaagata
tcagacttctcatggaaccctaacgaaccgtgggttatctgctctgtgtccgaagacaat
attatgcaggtatggcagatggctgagaacatctacaatgacgaggagcccgagacgccc
gcgtcggagctggaatctggtgtgaatgtgaaccacggctag
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