Spodoptera litura (tobacco cutworm): 111353719
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Entry
111353719 CDS
T08157
Name
(RefSeq) ATP-dependent RNA helicase DHX36-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111353719
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sliu03019
]
111353719
03012 Translation factors [BR:
sliu03012
]
111353719
Enzymes [BR:
sliu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111353719
Messenger RNA biogenesis [BR:
sliu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
111353719
Translation factors [BR:
sliu03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
111353719
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
HA2_N
DEAD
OB_NTP_bind
nSTAND3
AAA_19
HA2_C
AAA_11
RsgA_GTPase
AAA_22
Rad17
AAA_23
NB-ARC
ATPase_2
ABC_tran
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
111353719
NCBI-ProteinID:
XP_022822614
UniProt:
A0A9J7IQU6
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All DBs
Position
17:complement(6843647..6851192)
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AA seq
1068 aa
AA seq
DB search
MSRRSNWNRASYKNQNRGGRPHGLRGKDIGLYYRDLQRNKNKNMDLDYMINLSVPPAVLT
SLQKNIQSIKKIAKEHNIHVPPPKRLNFVTIKKDDKSEHRYDRKSSYPAHKNKYSDQSTS
LDTPSTSWDYNMQVDDVKESNAKEAKVGSSGEEDLNTGPEKAKSSLSSDERQPGPLRGAG
DYKYGYEDIITGTFEEKLEKCLNDGVNIAMNNPTIQALNESYYENYKTMINVDKYIKMKT
FRERLPTYKKTKELLEMFHNNQVVVISGETGCGKSTQIPQIILDNAIVNKNGANVHILVT
QPRRIAASSLAMRVAEERSEKVGTSIGYAVRLEVVDQRPRGSIKFCTTGVLLAELEINQG
LTNYSHVILDEVHERDCDIDISMLMLKQVLKQRKDLKLILMSATIDADRLRSYFDDCPVM
HIEGLAYPVEDIYLEDILQMTKYIPSFDQGTRAAHKGQRQKWKRKEEEMERDIQYKAEIA
PWLESVKKQLPREVYTVLKDARIEDLNINIIYELLLYICKGKPGAVLIFLPGIGDITNLL
KMIETSNNFPKSRFAIYPLHSKLPSLEQQKIFQRPPDYIRKIILATNIAETSITIDDIVY
VIDCGKIKYSGLNIEDNIPTLRTEWVAQANLRQRRGRAGRCQPGICYHLVTSFRASQLAE
RLLPEIQRNSLLEPVLAIKKLRLGKASLALSKMPSPPAETTVERAVKRLSQIGALDNDEK
LTPLGWHLARLPVHPAAGKLLLLGTLFGCLNRAASVAAVWGFKDPFQLVIGKEKEVDEAK
RTLALGEPSDHVAISEAVIQFEHYRTYHEKRKFAYENFLSCHTLELLSDMKRQFAGNLKQ
MGFLRNADIKSPWENRNMDNLSLFKAIVAASLYPNIATVKWKNINPRKRFLDPRLKVRTP
EDGSVSLHPSSVMAFKSYPPGRGYPLAPVCDSPGATWLVYWLKQRSSDLFLFDVTLIYTL
PFLFFGELAITEAPDPSNYCILISNIKVSCNKTTMDLLWELRSLLDQVLAAKISSSNINT
ASGNVFENQVLDAVMELITAEDECLDFISDNDSESDRSEYDSRRSWRR
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggcgtagtaattggaatagagcatcatataaaaatcaaaatcgtgggggcaga
cctcatggtttgcgcggcaaagacatcggcctttattatagagatctgcagagaaataaa
aataaaaatatggatctagattatatgataaatctatcagtaccacccgcagtactgaca
agcttgcagaaaaacatacaatctattaaaaagattgccaaagaacataatatacatgta
ccaccacctaaacgtttaaattttgttacaataaagaaagatgataaatctgaacaccgt
tatgatagaaaaagtagttaccctgcgcacaaaaataaatattctgatcagtccacgtca
ttggatactcctagtacctcttgggactataatatgcaggtagatgatgtaaaagaatca
aacgcaaaagaagcgaaagtgggatcatcaggtgaagaagatttgaatacaggtcctgaa
aaagcaaagtccagtctttcatcagatgaaagacagccaggtcctctaagaggtgccggt
gattataaatatggctatgaagacataattacaggtacttttgaagaaaaacttgaaaaa
tgtttaaatgatggagtcaatatagccatgaataaccccacaattcaagccttaaatgaa
tcatactatgaaaactataagacaatgataaatgttgataaatatatcaaaatgaaaaca
ttccgagagaggttaccaacatacaagaaaacaaaggaactgctagaaatgtttcacaat
aatcaagtggttgttattagtggtgagactggctgtggaaaatctactcagattccacag
ataattttagataacgcgattgtcaataaaaatggtgctaatgttcatattttagtcact
caaccgcggcgtatagccgcttcatccttggcaatgagagttgctgaggagaggtctgaa
aaagtgggcacatctataggatatgctgtcagattagaagttgtggatcaacgaccacgc
ggtagtataaaattttgtaccacgggagttttactcgcggaactggaaattaaccagggt
ttgactaactatagtcatgtgatactagatgaggtacacgagagagactgcgatattgac
atatccatgttaatgttgaaacaggtgctcaaacagcgcaaagatctcaaactaatttta
atgagtgcaacaatagatgctgatagactgaggtcttattttgatgactgtccagtgatg
catattgaaggcctagcctaccctgtagaggatatttatttagaagatatcctgcaaatg
acgaagtacattccatcgtttgaccaaggcacccgagcggcccacaaaggccaacgacag
aaatggaagcgaaaagaagaagaaatggagagagacatacaatataaagccgaaattgct
ccatggcttgagtccgtcaaaaaacagctcccccgtgaagtgtacactgtgctcaaagac
gcaaggattgaagacttgaacataaatataatttatgaactgctgttatacatatgtaag
ggaaaacctggcgcggtactgattttcctgccaggcattggagacataacaaatcttttg
aagatgattgaaactagtaataatttcccaaaatctcgctttgcaatctatccattacat
tcaaaattgccatcattagaacaacaaaagatattccagcgacccccagattatataagg
aagattatactggctacaaacattgctgagacgtctataactattgatgatattgtatat
gttattgattgcggtaaaattaagtatagtggactgaatattgaggataatatacccacc
ttgcgtacagagtgggtagcacaagctaatttaaggcagcggcgtggccgagctggtcgc
tgtcagccaggcatatgttaccatttggtgacgtcattccgagccagtcaactggcggaa
cgtcttctgccagaaatacaacggaactccttattagaacccgttctagctataaagaag
ttgcgtttaggcaaggcatctcttgctttgagcaagatgccgtctcctcccgctgaaacc
actgtggaacgagctgtcaaacgcttatctcaaatcggtgctctagacaacgatgaaaag
ttaaccccacttgggtggcacttagctcgtctgccagtccacccggccgcaggcaaactg
ctgctattaggcacattgttcggatgtcttaaccgcgcagccagtgtcgctgccgtatgg
ggatttaaggaccctttccaacttgttattggcaaggaaaaagaagtggatgaggcgaaa
cgcactctagctctaggcgagccgagtgatcacgtggctatatcagaagccgtcattcaa
tttgagcattaccgcacttaccatgagaaacgcaaatttgcatacgagaacttcttgtcc
tgccacactttagaactattgtcggatatgaagaggcagtttgcgggtaatttgaagcag
atgggcttcctacgtaatgctgatatcaagtctccatgggagaatcgcaacatggataat
ctgagcctcttcaaagctatagtggcggcctctctgtaccctaatattgcgactgtgaag
tggaagaatatcaatcctcgtaaacgtttcttagacccccgtctaaaggtgaggacacca
gaagatggctcagtgagtttgcacccaagcagtgtaatggcctttaagagctacccacca
ggacgtggataccccctcgccccagtgtgtgacagccctggagccacctggcttgtctac
tggcttaagcaacgatcatcagacctattcctctttgatgtaaccctgatctatactttg
cctttcttgttctttggagaattggccataactgaagctcctgacccatcaaactactgc
attttgatatccaatattaaagtaagctgcaacaagactactatggatcttctgtgggaa
ctgcggtctttattggatcaagtgttggcggctaagatcagtagctcaaacattaataca
gctagtggaaatgtcttcgaaaatcaagtattggatgctgtcatggagttaatcacggcg
gaggacgaatgtttagattttatttcagataatgattcggaatcagacaggtccgaatat
gactcacgtaggtcctggcgacgttaa
DBGET
integrated database retrieval system
