Spodoptera litura (tobacco cutworm): 111353813
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Entry
111353813 CDS
T08157
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111353813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sliu03041
]
111353813
Enzymes [BR:
sliu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111353813
Spliceosome [BR:
sliu03041
]
Complex A
U2 snRNP components
U2 related factors
111353813
Complex B
111353813
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
KH_12
ResIII
CdAMP_rec
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
111353813
NCBI-ProteinID:
XP_022822763
UniProt:
A0A9J7IPI0
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All DBs
Position
17:3072150..3088671
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AA seq
1030 aa
AA seq
DB search
MVRSGRDRDRDRDRRRSHSRSATPDRKRRRSRSRSRDRTSKSTKSRKRSRSRERESKRER
SRDRSRERERDRDRDRDRDRDRDRDRKSDKRDDKRNGSGKSSRKKSPDKEKERSKSKEKA
VKTESEYDPGTVDKEEEQSRLEAEMQKRRDRIERWRAERKRKELESAKKEVQKGSIVSNI
QVPASKKWSLEDDSGDEGEDPGAETKEKPVVDEKKVEEEEDEIDPLDAYMQEVQQEVRKV
NQMDQARGVINVPTTAGGTVVVLTGTAKKKVTEQKNKGELIEQNQDGLEYSSEEETEDIK
DAAANLASKQRKDLAKVDHASLNYMSFRKAFYTEVSELSRMTPEEVEAYRTELEGIRVKG
KGCPKPIRTWAHCGISKKEMDILRKLNFEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTL
AFILPMFRHVLDQPPLEDTDGPIALIMTPTRELCMQIGKDIKKFAKSLGLRVVCVYGGTG
ISEQIAELKRGAEMIVCTPGRMIDMLAANSGRVTNLRRVTYIVLDEADRMFDMGFEPQVM
KIIDNVRPDRQTVMFSATFPRQMEALARRILQKPIEVQVGGRSVVCKDVEQHVAILEEDA
KFFKLLELLGLYSQMGSIIVFVDKQENADSLLKDLMKASYSCMSLHGGIDQFDRDSTIVD
FKSGKVKLLVATSVAARGLDVKQLVLVVNYDCPNHYEDYVHRCGRTGRAGNKGYAWTFLT
PEQGRYAGDVVRAFELAGAVPPHELRQLWDKYKDAQEKEGKKVHTGGGFSGKGFKFDESE
AQAATEKKKYQKAALGLQDSDDEDVEGDLDQQIEVMLAAKKIVKEIKPGVAAAGVAGAGG
AAAGAGADRKLELARRLAAHINLSKGLGAEHKGATQQAAEAILKGAPSAHTLITAKTVAE
QLAAKLNTRLNYQPRDESASEPAEEVFRKYETELEINDFPQQARWRVTSKEALALISEYS
EAGITVRGTYVPPGKTPPEGERKLYLAIESSQELAVAKAKSEITRLIKEELLKLQTSAHH
MINKARYKVL
NT seq
3093 nt
NT seq
+upstream
nt +downstream
nt
atggtgagaagtgggcgtgatcgtgatagagaccgcgatcgaaggcggtctcacagccga
tcggcaacgcctgaccgtaagaggaggcggtccaggtctagatctagagacaggacttct
aaatcgacgaagagtagaaagcgtagtcgtagcagggagagggagtccaagagagaacgt
agtagggaccgtagcagggaacgcgagcgtgatagggatcgtgatcgtgacagagatcgt
gacagggatcgtgacagaaagagtgataagcgtgatgacaagaggaatggatcaggaaag
tcctcaaggaagaaatcaccagataaagagaaggaaaggtccaagtcgaaagagaaagct
gtcaaaactgaatctgagtatgatccaggaacagtagataaggaagaagaacaaagtcgt
ttggaagctgaaatgcagaagcgacgagatcgtatcgaacgctggcgtgctgaaagaaaa
cgtaaagaattggagtctgctaaaaaagaggtccagaaaggcagtattgtaagcaatata
caagtaccagcaagcaagaaatggtcactagaagatgattctggcgatgagggtgaagat
ccaggtgcggaaaccaaagagaaaccagtggtggatgaaaagaaagtggaggaagaagaa
gatgaaatagatccactggatgcttacatgcaagaggtgcaacaggaggtgcgtaaagtg
aatcagatggatcaggcgcgaggtgtcataaatgtgcccaccactgcaggcggcactgtc
gtcgtactaacaggcacagctaagaagaaagtcactgaacagaaaaataaaggagaatta
atagaacagaatcaggatggtctggaatattcttcggaggaggagacggaggacattaag
gatgccgccgcgaacctggcttcgaagcaaaggaaggacctggctaaagtcgaccacgca
agtctcaactacatgtctttcagaaaagctttctatactgaagtaagtgaattatccaga
atgactccagaagaagtagaagcatacagaacagagttagaaggtatccgagtgaagggc
aagggttgccccaaaccaatcaggacttgggctcattgcggtattagtaagaaagaaatg
gatatactaaggaaacttaactttgagaagccaactcctattcaagctcaggccatccct
gccattatgtctggcagagaccttatcggaatagcaaagacagggtcaggcaaaaccttg
gcctttatcctgccaatgttccgccacgtacttgaccagccgcccttggaagacacagac
ggacccattgcactcatcatgactcctaccagggaactctgcatgcaaatcggcaaggac
atcaagaaattcgccaagtccttaggcttaagagtagtctgtgtctacggtggcaccggg
atctctgaacagattgcagaattaaaacgaggggcagaaatgatagtgtgtactccaggc
cgtatgatcgacatgttggctgccaactccggccgagtgaccaacctgcgccgcgtcaca
tacatagtgctggatgaagctgacagaatgttcgatatgggctttgaacctcaggttatg
aagattatagacaacgtcaggcctgatcgtcagactgtgatgttcagtgctacattcccg
agacaaatggaagctctcgccagaaggatattgcagaaacctattgaagtacaggtcggc
ggcagaagtgtagtttgcaaagacgtggagcaacacgtagctatcttagaagaggatgcg
aagttcttcaagttgctggagttgctgggactgtacagccagatgggcagcatcatcgtg
ttcgtggacaaacaggagaacgctgacagtctactcaaagacctcatgaaagcctcctac
tcatgcatgagcttgcatggagggattgatcaattcgacagggactcaactatcgtggac
ttcaagtctggcaaggtgaagctgctggtcgctaccagcgtggcggcgcgagggttggac
gtcaaacaactcgtactcgtcgtcaactacgactgccctaatcattacgaggactatgtt
cacagatgtggtcgtacgggtcgtgccggcaacaaaggctacgcgtggacattcctcact
ccagagcagggtcgctacgcgggcgacgtcgtgcgggccttcgaactggccggggcggtg
ccgccgcacgaactcaggcagctctgggacaagtataaggatgctcaggagaaggaaggc
aagaaagtgcatactggtggcggctttagcgggaaaggttttaaattcgacgaatcagaa
gcccaagcggccactgaaaagaagaagtatcagaaggcggctctcggtctccaggattct
gatgatgaagacgtggaaggtgacctggatcagcaaatagaggtcatgctagctgccaag
aagattgttaaagagatcaagcctggagtagcagcggcgggagtggcgggcgcgggcggc
gcggcggcgggcgcgggcgccgaccgcaagctggagctggcgcgccgcctcgccgcgcac
atcaacctgtccaagggactcggcgccgagcacaagggcgccacgcaacaagctgcagag
gccatactcaagggcgcgccctcggcacacacacttatcactgctaaaacagtagcagaa
cagctggctgccaagttgaacacgcgtctgaactaccaacccagggatgagagcgcgtcg
gaacctgctgaggaagtgttcaggaagtatgagacagaactggagatcaatgacttccca
caacaagctcgctggagagtcactagcaaggaggcgctagcgttgatcagcgagtattcc
gaggccggtataacggtgcgaggtacctacgtcccgccgggtaagacgccgcctgaagga
gagcgtaagctgtacctcgcgatagaaagctcccaagaactcgccgtcgccaaagccaaa
tcggaaataacgcgcctcatcaaggaagaactcctcaaactgcaaacctccgctcatcac
atgattaacaaggctagatacaaagtgttgtaa
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