Spodoptera litura (tobacco cutworm): 111354042
Help
Entry
111354042 CDS
T08157
Name
(RefSeq) probable ribonuclease ZC3H12B
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
sliu
Spodoptera litura (tobacco cutworm)
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sliu03019
]
111354042
Messenger RNA biogenesis [BR:
sliu03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
111354042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH
zf-CCCH_4
RuvA_C
PaaX
Motif
Other DBs
NCBI-GeneID:
111354042
NCBI-ProteinID:
XP_022823080
UniProt:
A0A9J7IS32
LinkDB
All DBs
Position
17:complement(3031173..3043437)
Genome browser
AA seq
579 aa
AA seq
DB search
MSHETDLVISVPRSRINEFYCKYYNLVETFYCVTLSESKLCSANEKPDYVYFNVTFNLNP
ADGSFNPKELTGRIQKYVESSVGCAGERGEDSSYDSECEDESAHRAASRTPSDTLAAEFA
EYVTLTPPQPNQAKIEFAMKLGYSERLARTAIQRLGPDPPCNELLAELIKLAAKQPPRAL
SPTPPAEPDPPPDRAPLRHIVIDGSNVAMSHGNKEVFSCRGIEICVEWFRARGHREITAF
VPKWRKESARPNNPIVDRDALERLERDRVLVYTPSRLLGGKRLVCYDDRYILRLAAETDG
IVVSNDNYRDLAVENPDFRKVVEERLLMYSFVNDRFMPPDDPLGRSGPTLDAFLRAPVSR
AEPPPACPYGRKCTYGNKCKFHHPERAGRPQKSVAEKLSERAAKTLRSRDLHTVSLPPGG
RPSDAKRQLARAQSAAPRLHDATLATHFDRAQLQVAAPPQLQVPGPTLQVSGPLQVPGPS
QPPPEVNPHRKLARQLTLNPACDPRLQTHALAARVASAPGAGALQHWDARRRMHYHLAGI
FPEAQVAEAMAAYPEETDAQTMCAIILARYRPSEARVPH
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atgtctcacgagacggatcttgtaatatcagtgccgcgttcccgtataaatgaattttac
tgcaaatattataatttagttgaaacattttactgtgtcacactgtctgagagtaaattg
tgttccgcgaacgaaaaacctgattatgtgtatttcaacgtcacgttcaacttgaatcca
gcagatggaagtttcaatccgaaggaattgactgggagaatacagaaatatgtggagtca
tcagtggggtgcgcaggagagcgcggcgaggattccagttatgactcggagtgtgaggat
gagagtgcccaccgtgcggcctctcggaccccctccgacaccctcgctgccgagtttgca
gagtatgtcactctcacaccaccacaacccaaccaggcaaagatcgagtttgctatgaag
ttgggttactcggagcggttggcgcggacagcgatacagcggttgggccccgacccgccg
tgcaacgagttgttggcggagctgatcaagctggccgccaagcagccgccgcgcgcgctg
tcgcccactccgcccgcggaaccagacccgccacccgaccgcgcgccgctcaggcacatc
gtcatagacggcagcaacgtcgctatgagccatggcaacaaagaagttttctcgtgtcgc
ggtattgaaatctgtgtggagtggttccgtgcacgcggccatcgagagatcacagcattt
gtgcccaaatggcgaaaggaatcagcacgtcccaacaaccccatagtggacagagacgcg
ctcgagcgcctggagcgggacagagtgctcgtgtacactcccagcagactgctgggcggc
aagcgcctcgtctgctacgacgaccgctatatccttcgtcttgcagctgaaaccgatggc
atcgtagtgtccaacgacaactatcgcgacctcgctgtggagaacccagacttccggaaa
gtagtcgaagagcgtctacttatgtattctttcgtgaacgaccgatttatgcctccggat
gatccgctcggtcgctcgggaccaacgctggacgcgttcctgcgcgcgccagtgtcccgc
gccgagcctccgcctgcctgtccgtacggtcgcaagtgtacgtacggcaacaagtgcaag
ttccaccacccggagcgcgcgggcaggccgcagaagtctgtcgcggagaaactgtccgag
cgcgccgccaagacactgcgctcgcgcgacctgcacaccgtcagcctgccgcccggcggc
cgcccgtccgacgccaagcgacagctcgcgcgcgcgcagtccgccgcgccgcgcctgcac
gacgccacgctcgccacacacttcgaccgcgcgcagttgcaggtggcagccccgccacag
cttcaagtgccgggccccacgctacaggtctcgggccccttacaggtcccgggcccgtct
cagccgccgcccgaggtgaacccgcaccgcaagttggcgcgccagctgacgctgaatccg
gcgtgcgacccgcgcttgcagacgcacgcgctggccgcgcgggtggcgagcgcgccgggc
gcgggcgcgctgcagcactgggacgcgcggcgccgcatgcactaccacctggcggggata
ttccccgaggcccaggtggcggaggccatggcggcgtaccctgaggagacggacgcgcag
acgatgtgcgccatcatcctggctaggtaccggccgagcgaggcgcgcgtgcctcactga
DBGET
integrated database retrieval system
