KEGG   Spodoptera litura (tobacco cutworm): 111354137
Entry
111354137         CDS       T08157                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein
  KO
K12857  Prp8 binding protein
Organism
sliu  Spodoptera litura (tobacco cutworm)
Pathway
sliu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sliu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111354137
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:sliu03041]
    111354137
Spliceosome [BR:sliu03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    111354137
 Complex C
   U5 SnRNP specific factors
    111354137
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 Beta-prop_TEP1_2nd WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st NBCH_WD40 ANAPC4_WD40 WD40_RFWD3 Beta-prop_SCAP WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_SPT8 Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_DCAF4 Beta-prop_WDR75_2nd eIF2A WD_LRWD1 Beta-prop_NWD2_C Beta-prop_WDR35_TULP_N Cytochrom_D1 Beta-prop_HPS5 KNTC1_N Beta-prop_Nup120_160
Other DBs
NCBI-GeneID: 111354137
NCBI-ProteinID: XP_022823196
UniProt: A0A9J7IQ25
LinkDB
Position
17:12504786..12507194
AA seq 349 aa
MPELEAKRKADDLSIVPAKRTRHEISVVGTREKAVVTSSVPRTSNLYAPIMLLEGHQGEV
FTSKFHPEGKHLASAGFDRQIFLWNVYGQCENVMVMKGHTGAVMELCFSPDGSHLYSCAT
DNTVAVWDVPTGTRIKKLKGHASFVNSVSGARRGPELLVSASDDNTIKLWDARKRNPIAS
FDSGYPVTSVLFNDTAEKIISGGIDNVVKVWDIRNNQISYKIKGHTDTITGMALSYDGSY
LLSNSMDNTLRIWDVRPFAPSERCVKLMSGHQHNFEKNLLRCAWSHDGSKVAAGSSDRFL
YVWDTTSRRVLYKLPGHNGSVNDVDFHRTEPIVLSASSDKQLYLGEIDN
NT seq 1050 nt   +upstreamnt  +downstreamnt
atgcctgaattagaagcgaaacgaaaagcggatgacttatccatagtgccagcaaaacgc
actcgacatgaaatatcagttgttggtactagggagaaggcagtagtaacatcatcagtg
cctcgtacatcaaacctctatgcgcctataatgttattagaaggccatcagggcgaagtg
tttacatccaagtttcaccctgaaggaaagcatttggcttcggcaggttttgaccgacaa
atattcctatggaatgtgtatgggcaatgcgagaatgtgatggtgatgaaggggcacacg
ggtgctgtgatggagctgtgcttctctccggatggatcccacctgtactcctgtgccaca
gataatacagtcgctgtgtgggatgtaccaactggaactaggatcaagaaactcaaaggc
catgctagttttgttaactctgtgtcaggtgccaggagaggtccagaattattagtttca
gcatcagatgacaatactattaaactatgggatgctagaaagcggaaccctatagcctcg
tttgacagtggctatccagtcacctcggtcctgttcaatgatactgctgagaagatcatc
tctggtggaattgacaatgttgttaaagtttgggacatcaggaacaatcaaatttcatac
aaaatcaagggtcatacggacactatcacaggcatggccttatcctatgatggttcatac
ttactctccaactccatggataacacactgaggatatgggatgtacggccattcgcacca
tctgaacgctgcgtcaagctcatgtcaggtcatcaacataattttgagaagaacctgctc
cgctgtgcgtggtcacatgatggctctaaggtggcagcaggatcgtcagatcgcttccta
tacgtgtgggacacgacgtcacgtcgcgtactgtacaagctgcccggccacaacggctcc
gttaatgacgtcgacttccataggacagaacctatagtactctcagcatctagtgataaa
caactttatctcggcgaaattgacaattaa

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