Spodoptera litura (tobacco cutworm): 111354820
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Entry
111354820 CDS
T08157
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm2
KO
K12621
U6 snRNA-associated Sm-like protein LSm2
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03018
RNA degradation
sliu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111354820
09123 Folding, sorting and degradation
03018 RNA degradation
111354820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sliu03019
]
111354820
03041 Spliceosome [BR:
sliu03041
]
111354820
Messenger RNA biogenesis [BR:
sliu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111354820
mRNA degradation factors
5'-3' decay
Lsm complex
111354820
Spliceosome [BR:
sliu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111354820
Complex C
U2 snRNP components
111354820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
111354820
NCBI-ProteinID:
XP_022824200
UniProt:
A0A9J7E4C1
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Position
19:complement(6132896..6133367)
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AA seq
95 aa
AA seq
DB search
MLFYSFFKSLVGKDVVVELKNDLSICGTLHSVDQYLNIKLSDISVIDPEKYPHMLSVKNC
FIRGSVVRYVQLPADEVDTQLLQDAARKEATVSTR
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgctgttctattccttcttcaaatcgctggtggggaaagatgtagtagtggagctgaag
aacgacctcagtatatgcggtacattgcattctgttgaccagtatttgaacataaaactg
tcggatatcagcgtgattgatcctgagaaatatcctcacatgttatcagtgaagaactgc
tttatccgtggttctgtggtacgttacgtgcagcttccagctgatgaagtcgacacccag
ttactccaagacgcagcgcgtaaagaggccacagtttctacaagataa
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