Spodoptera litura (tobacco cutworm): 111356012
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Entry
111356012 CDS
T08157
Name
(RefSeq) fibril-forming collagen alpha chain-like
KO
K19719
collagen type II alpha
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111356012
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
sliu00536
]
111356012
Glycosaminoglycan binding proteins [BR:
sliu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111356012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
FnI_RECK
Motif
Other DBs
NCBI-GeneID:
111356012
NCBI-ProteinID:
XP_022825970
UniProt:
A0A9J7IST5
LinkDB
All DBs
Position
22:complement(11720877..11735530)
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AA seq
1497 aa
AA seq
DB search
MRWLKAACWALLVLPATCKELSEVPIREEIIQELPQAQDPDLINYDDYNPTFEEDENAVI
GDRFREPSSTTPPYRRPTPARTVRPTPKCVDIGRTWNEGENWKRDNCTLCQCHAGRVNCS
TIPSCLTAAPTRPVLIGAAAQPTTPVRGSVGLQGDDGPPGPPGQPGVNGVPGAPGLPGPV
GQMPDVNAYLAQLAASAGGDKGPPFDPYQYMQASVGTPGVRGIPGPQGPPGPQGFQGPRG
EPGEPGLPGQLGPPGERGPQGLPGKDGSPGDDGEPGPAGVIGQTGPRGLPGVPGIQGLKG
HRGFDGKDGAKGEQGLPGEKGPTGMPGPMGPAGPVGPVGARGERGREGPPGPPGVRGVDG
APGPQGLMGNVGKPGSPGFPGAPGLKGEQGVSGPKGSQGMQGPRGEAGRPGQPGEVGTPG
IPGRDGIPGEKGVQGQPGASGPQGFPGPRGLPGVAGDAGLPGSKGMPGQPGERGQKGDSG
IRGEPGAPGPRGLPGNIGPEGKRGKRGLRGPAGNVGPQGERGLQGMRGLPGSDGPMGAKG
QPGERGGVGLPGSKGSSGDPGRPGPQGLQGPRGTIGRPGMPGKTGPQGERGIPGADGRPG
EQGSQGIQGPPGLMGGPGERGLQGEPGKDGEPGQAGPQGPKGDAGRDGGPGIQGPQGVAG
PPGERGPSGPAGPTGFPGMPGAAGLPGSPGKEGEPGMAGPAGPPGPSGPRGERGFTGDRG
QPGQPGSPGEKGETGAQGPDGPPGPEGLRGSKGHPGSPGAMGLPGQRGLTGAPGEKGERG
AAGPPGNDGQPGRQGEQGPQGPMGPVGPAGEPAERGEPGAPGIPGELGASGSPGERGQPG
PQGAPGLSGPPGLTGMPGLKGERGYAGSKGQQGSPGSPGVPGESGPRGLPGLAGAKGARG
DHGPKGETGHVGLPGRPGDLGPPGPQGSTGPAGAPGIPGAKGATGDTGRPGPTGPVGLAG
PQGAEGPKGERGSEGEPGLQGPVGPPGAAGERGPIGLPGVIGPVGPQGLRGAQGESGAPG
KPGADGAPGTPGNPGLQGPPGPMGEPGPEGRPGKQGQPGISGRPGDKGPTGPPGASGPGG
PPGLQGPPGPSGPSGPTGERGPRGESGPPGVDGPQGPPGKVGPAGLDGTKGERGEPGIDG
SKGHAGLPGLPGMVGAPGRTGERGLPGPMGPPGKDGEVGPRGTPGRDGSPGLQGPQGLPG
GRGPQGEAGRHGAPGPAGPPGPPGPPGEGLAYDAAAIAAMLQQGSVKGPDPLGDDPNSLP
PRFFKEDMTPAERKEVVMKAYERLKVSLDKFLKPDGSKEAPAKTCGDIKYHHPEFESGQY
WIDPNGGDINDAIVVHCEMETGSSCVFPKPMQSQDITYDGKEHEPWLSEIDEGFTITYKA
DHTQLTYLQLMSTKAVQNVTFHCRNTIGYYDPTANNYRRGIKLLAYNDAEILPKANNRLR
YKAILDECQHKSSNWARTIVEYQTDKPARLPLLDVAVRDVGRPQQMFRVELGLACFS
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atgcggtggttgaaggcagcttgctgggcactgctggtgctaccggcaacctgcaaggaa
ctatcagaggttccaatccgtgaggagataatacaagaactaccgcaggcccaggatccc
gatctcatcaactatgacgattacaaccctactttcgaagaagatgaaaatgctgtcata
ggcgatagattccgtgaaccatcaagcaccacgccgccttaccgaagacctactccggca
agaacggttagaccgactcccaaatgtgtggacattggtcggacgtggaacgagggagag
aactggaagcgggacaactgcacgctctgccagtgccacgctggacgtgtcaactgctcc
accataccttcctgtcttactgctgctccgacaagaccagtgttaatcggcgcagcggct
caaccaacgacgccggtgcgcggatctgttggcttgcaaggagatgatggaccgcccggc
ccgcccggacagcctggcgtcaacggcgtccctggtgcccctggcttgcctggacccgtt
ggacaaatgcctgatgtaaatgcatacttggctcaacttgcggcttcagctggcggtgac
aaaggacctccattcgatccataccagtacatgcaagcttccgtcggtaccccgggcgtc
agaggcataccaggaccacaaggccctcccggcccacaaggtttccaagggccgagggga
gagcctggagaaccaggtcttcctggacaactaggaccaccgggcgaaagaggaccccaa
ggattacctggaaaagatggttcaccaggagatgacggagaacctggccctgctggtgtt
ataggtcaaaccggacctcgtggtctcccaggagtacctggcattcaaggtttgaaagga
catcgaggttttgacggcaaagatggtgctaaaggagagcaaggattgccaggagaaaaa
ggacctactggcatgcctggtcctatgggtccagctggacccgtgggcccagttggtgca
agaggtgaaagaggtcgtgaaggacctcccggtcctccaggagtacgaggcgttgatggt
gctccgggaccccaaggattaatgggcaatgttggcaagccgggttcaccaggattccca
ggtgctccagggctaaaaggtgaacagggtgtttctggaccaaaaggcagtcaaggaatg
caaggacctcgaggcgaagcaggtcgtcctggacaacccggtgaagtgggaacgccgggt
ataccaggccgtgatggtattcctggagagaaaggtgtacaaggacaaccaggggcttca
ggcccacaaggtttcccaggacctagaggattgcctggagtagcaggagatgcaggatta
cctggatcaaaaggaatgccgggtcaacctggtgaacgaggccaaaaaggagacagtgga
atcagaggggaacctggtgcacccggaccgcgcggtctacctggtaatattggtccagag
ggaaaacgaggaaagagaggactgagaggacccgctggcaatgtaggacctcaaggtgaa
agaggattacaaggcatgagaggtttacctggttcagacggacctatgggtgctaaaggt
caacccggtgagagaggcggtgttggattacctggatctaagggaagttctggcgaccct
ggcagaccaggacctcaaggcctacagggaccaaggggaactatcggaaggcctggaatg
cctggtaaaactggtcctcaaggtgaaaggggcataccaggagctgatggaagacctgga
gaacagggatctcagggtattcaaggtccgcctggattaatgggagggcctggtgaacga
gggttgcaaggtgaacctggtaaagatggtgagccaggacaagctggacctcaaggaccg
aagggtgatgcgggtcgcgacggtggacctggaattcaaggtcctcaaggtgtcgccgga
cctccaggagaaagaggcccttctggacctgctggacctactggattccccggtatgcca
ggagccgctggtctacctggttcacctggtaaggaaggtgagccaggcatggctggacct
gccggcccaccaggaccatcaggtcctcgtggagagagaggtttcactggcgatcgagga
caaccaggacaacctggaagcccgggagaaaagggagaaaccggcgctcaaggtcctgat
ggacctccgggtcccgaaggtctgagaggtagcaagggtcatccaggctctcccggtgcg
atgggcttgcctggacaacgcggtctaactggagctccaggagaaaaaggagaaagaggc
gctgctggaccacctggcaatgatggacaaccaggacgacaaggtgagcagggtcctcag
ggtcctatgggtcccgtcggacctgctggtgaacctgccgagagaggagaaccgggagct
cctggtattcctggagaattaggagcaagtggatcacctggagaaagaggacaacctgga
cctcagggtgctcctggtttatccggcccacctggtcttactggaatgcctggtctaaaa
ggggaacgaggttacgctggatctaaaggtcaacaagggtcgcctggaagcccaggtgta
cccggtgagtctgggccacgaggactaccaggtttagctggagccaaaggtgctcgcggt
gatcatggaccgaaaggagaaaccggacatgttggtttgcctggaaggccaggagattta
ggaccaccgggcccacaaggaagtacaggccccgcaggtgcccccggtatacctggcgct
aaaggagctaccggtgacactggtcgcccaggacccaccggccctgtagggttagctgga
cctcagggagctgaaggaccaaaaggcgaaagaggcagcgaaggcgaaccaggcttacaa
ggtccagttggtccacctggagcagctggtgagagaggacctattggtttacctggtgtc
attggacctgttggaccacaaggactgcgaggcgctcagggtgaaagtggtgccccaggt
aagccaggcgcagatggtgctcctggtacaccaggaaatccaggattacaaggcccacca
ggcccaatgggtgaaccaggtccagaaggccgtcccggcaaacaaggtcaaccgggtata
tcgggacgaccaggtgataagggacctactggacctcctggcgcatcaggaccaggtggc
ccaccaggactacaaggaccaccaggaccgtcaggaccttctggaccaacgggtgaacgc
ggacccagaggtgaaagtggaccacctggagttgacgggcctcagggacctcctggcaaa
gtcggacctgccggcctcgatggcactaaaggagaacgaggagaacctggtattgatgga
tctaagggacacgctggcttgccaggtttacctggaatggttggtgcacctggaagaact
ggagaacgaggtttacctggaccaatgggacctccaggaaaagatggagaggttggacca
cgaggcactcctggccgtgatgggagtcctggtctacaaggaccacaaggattacctggt
ggccgtggaccacaaggagaagccggtaggcatggagcacctggacctgctggaccaccg
ggacctcctggcccacctggagagggactggcttatgatgctgctgctattgctgctatg
ttacaacaaggttcagtgaaaggtcccgacccattaggggatgacccgaactctctacct
cctcgcttcttcaaggaggacatgacaccagctgaacgtaaagaggttgtgatgaaagct
tatgaaagactgaaggtgtcgctcgacaaattccttaaacctgacggctccaaagaagca
ccagccaagacttgcggcgatattaaataccaccaccctgagtttgaaagcggccaatat
tggatcgaccctaatggaggtgatataaacgatgctatcgtggtgcattgcgagatggaa
actggcagcagctgcgtgttcccgaaaccgatgcagtctcaggacatcacgtacgatggc
aaggaacacgagccatggctgagcgaaatagatgaaggattcacgattacctacaaggcc
gaccatacacaactgacgtatctacagctgatgtccacgaaggctgtccagaatgtaacc
ttccactgtcgcaacaccatcggttattacgaccccacagccaacaactaccgccgcggc
atcaaactgttggcttacaacgacgctgagatcctgcccaaggctaacaaccgtttgaga
tataaggccatcttggatgagtgccaacacaagagctcaaactgggcgcgcactatcgtt
gagtaccaaactgacaagccagctcgtctcccactcttggatgtagctgttcgagacgtc
ggcagaccacaacagatgttcagggtcgaactcggattagcttgcttcagttaa
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integrated database retrieval system
