Spodoptera litura (tobacco cutworm): 111356849
Help
Entry
111356849 CDS
T08157
Name
(RefSeq) replication factor C subunit 1-like
KO
K10754
replication factor C subunit 1
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03030
DNA replication
sliu03410
Base excision repair
sliu03420
Nucleotide excision repair
sliu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
111356849
03410 Base excision repair
111356849
03420 Nucleotide excision repair
111356849
03430 Mismatch repair
111356849
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sliu03032
]
111356849
03400 DNA repair and recombination proteins [BR:
sliu03400
]
111356849
DNA replication proteins [BR:
sliu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
111356849
DNA repair and recombination proteins [BR:
sliu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
111356849
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA_lid_RFC1
AAA
PTCB-BRCT
Rad17
AAA_30
AAA_22
AAA_14
AAA_33
AAA_5
NTPase_1
RNA_helicase
AAA_16
RuvB_N
RCF1-5-like_lid
AAA_assoc_2
BRCT_2
AAA_19
Motif
Other DBs
NCBI-GeneID:
111356849
NCBI-ProteinID:
XP_022827105
UniProt:
A0A9J7IXQ6
LinkDB
All DBs
Position
2:complement(11977093..12002024)
Genome browser
AA seq
1171 aa
AA seq
DB search
MSRDIRSFFQPKKPPKPAVTVDDDDDVIPESPDVQIIKNKKKESKKRRVINDDSDEEIFS
SKKKKTNDAISEKGGQTSSKNKSKSPKPALKEVKVTDMFGNYPIKRTEPLVKKKKKTELG
IHSDDEFEKSLLEIDNAELEGNINNDKVTNDEKSKSSTEKVTPSKSTEESHKETKTSHEK
KHKSPTETKNDEHKSSKGDKAKSDESKESKHKTDESKESRHKNDESRHKSDDAKAKKHTK
DDKKPNQSTSHSNDGETKKSKIENSKRKFAEFIDGDTSDHGSKKKKVDEQEKESKHKYDG
NSSVMDESMESSRKRNMNKSLNESALPDEERHERRMHSAALYKNYLNRSGPKHLGAKEIP
EGKPDCLKDCAFLLTGVLDSFEKDEVAAAITKYGGCVKSGVSKKVTHVIAGEDAGPAKMA
KAQELGIKIINEDEFLKMIVDRSRDNTSKTEIKKEIKREKTPSKSKSKSPKDKKDNHVDK
LKSPDRSKSETKVRDKSSESKHRDKSSPKKIKAEKVEASSSSHTARNQVNTDDEDDFDKV
YFLPAQVTHVIAGEDAGPAKMAKAQELGIKIINEDEFLKMIVDRSRDNTSKTEIKKEIKR
EKTPSKSKSKSPKDKKDNHVDKLKSPDRSKSETKVRDKSSESKHRDKSSPKKIKAEKFEA
SSSSHTARNQVNNVKKEVNPIQDNSNMWVEKYKPQSIKQIIGQHGDASNVKKLMNWLTKW
YVNRKAKLPKPSPWAKNDDGGYYKAALLSGPPGVGKTTSVALVCKELGFDMVEFNASDTR
NKTLIKEQIGQLLTTNSLSGFANGVTGKQAVTKKHVLVMDEVDGMAGNEDRGGLQELIAL
IKSSSVPIICMCNDRQSQKMRSLVNYCYDLRFNRPRVDQIKSAMLSICFKEGIKIPSDVL
SQLIVSANQDVRQTLNLLSMWAIDPSRADADSLRKDAQTTKKDIKLGPFEAIRKVFSAED
HKTMSINDKSDLFFYDYSLAPLFVQENYLQVAPHCPKNEVLQRISEAADSISLGDLVDAR
IRRNQAWSLLPMQAMYSSVIPGNRLSGHMTGQIQFPAWLGKNSRATKMKRLCQEIHAHTR
LRYQVKAAMTRSYNKKATALPYAPGAVKKGRAKADDEFGDDDQEEEEENNDSDPENDALI
KKKKSKDTEKPTTSKGKATSKASTGKKKKEK
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgtctagagatataagatcgttttttcaacctaaaaagccgccgaaacctgctgtcact
gttgacgatgatgacgatgttattccagagtctccagatgtacaaataattaaaaataaa
aagaaagaatcaaagaagaggcgtgtaataaatgatgattctgacgaggaaatattctca
tctaaaaaaaagaaaactaatgatgctatttctgaaaaaggaggtcaaacttcaagtaag
aataagagtaaatcacctaaacccgcactcaaggaggtcaaggtgacagatatgtttgga
aattaccctataaagcgcacagaaccattagtaaagaaaaagaaaaaaactgaactaggc
atacactctgacgatgaatttgaaaaaagtttactcgaaatagacaatgcagagttagaa
gggaacataaataatgacaaagtaacaaatgatgagaaatcaaaatctagcactgaaaag
gtgacaccatcgaagtcaacagaggaatcacataaagaaactaaaacatcacatgaaaag
aaacataagagccctacagaaacaaagaatgacgaacataaatcaagcaagggtgacaaa
gctaaatctgatgaaagcaaagagagtaagcataaaactgatgaaagcaaagaaagcaga
cataaaaatgatgaaagcagacataaatctgatgatgcaaaagcaaagaaacacacaaaa
gacgacaagaaaccaaaccaaagtacatcacactcaaatgatggtgaaactaaaaaatct
aaaattgaaaatagtaagagaaagtttgcagagtttattgatggtgataccagtgatcat
ggtagtaagaagaagaaggttgacgaacaggagaaagagagcaagcataaatatgatggg
aattcttctgttatggatgaaagtatggagagtagtaggaaacggaatatgaataagagt
ttgaatgaatcagccctaccagatgaagaaagacacgaaaggcgaatgcattcagctgct
ttatacaaaaattatttgaacagatctggaccaaagcatttaggagctaaagaaatccct
gagggaaaaccagattgtttgaaggattgtgcgttcttgttgactggagtgctggactcg
tttgagaaggatgaggtagctgctgccatcaccaagtatggaggctgtgtcaaatctgga
gtttctaaaaaagttacacacgtgatcgcaggcgaagacgctggcccagcgaaaatggca
aaggcacaagaactaggaatcaaaattataaacgaagatgaattcctaaaaatgatcgta
gaccgatcacgagataacactagtaaaacagaaatcaagaaagaaatcaaacgagaaaag
actcctagtaaatctaaatctaagagtccgaaagataagaaagataatcatgttgacaaa
ttgaagagtcctgacaggagtaagtcggaaactaaagttagagataaaagtagtgagagt
aaacatcgtgacaaatctagtccaaagaaaatcaaggcagaaaaagttgaagcaagttcg
agctcgcatacagcaaggaatcaagtaaacactgatgatgaagatgacttcgataaagta
tactttcttcctgcacaggttacacacgtgatcgcaggcgaagacgctggcccagcgaaa
atggcaaaggcacaagaactaggaatcaaaattataaacgaagatgaattcctaaaaatg
atcgtagaccgatcacgagataacactagtaaaacagaaatcaagaaagaaatcaaacga
gaaaagactcctagtaaatctaaatctaagagtccgaaagataagaaagataatcatgtt
gacaaattgaagagtcctgacaggagtaagtcggaaactaaagttagagataaaagtagt
gagagtaaacatcgtgacaaatctagtccaaagaaaatcaaggcagaaaaatttgaagca
agttcgagctcgcatacagcaaggaatcaagtaaacaatgtaaaaaaagaagtgaatccc
atacaagataattcgaatatgtgggtggagaaatacaagccacagagtatcaaacaaatt
attggacaacatggcgacgctagcaatgttaaaaagttaatgaattggctgacgaaatgg
tatgtgaatagaaaggctaaactaccgaaacccagtccctgggctaaaaatgatgacgga
ggttattataaagcagctttactttctggaccgcccggcgtcggtaaaacaacatcagtg
gcgttagtgtgcaaggagctcggcttcgacatggtggagttcaacgcgtcagacacgagg
aacaagacgctcatcaaggaacagatcggacagctactcactactaattcactctctggc
tttgctaatggtgtgactggtaaacaagcagtaacaaagaaacacgtgctggtcatggat
gaagtcgacggaatggccggcaatgaggatagaggtggtctccaagagttgatagcatta
ataaaatcgtcatcagtgccaataatatgcatgtgtaatgacagacagagtcagaagatg
aggtctcttgtcaactactgctacgatctgaggttcaataggccaagagtcgaccagatt
aagtcagcgatgctctcgatatgcttcaaagagggtataaagatcccctctgacgtgctc
agtcagttgatagtctccgccaaccaagatgtccgacagaccctgaacttgttgtccatg
tgggccatagaccccagtcgcgctgatgcagacagtctcaggaaggatgctcagactacc
aagaaggatattaagctgggtccattcgaggcgatccgcaaggtgttctcagcagaagac
cacaagacgatgagtatcaacgacaagagcgacctgttcttctacgactacagcctcgcg
ccactctttgtacaggagaactatttacaggtcgccccgcactgtcctaaaaatgaagtg
ttacaaaggataagcgaggcagcggacagcatcagcttgggtgacttggtagacgcgcgg
atacgccgcaatcaagcgtggagtctattgccaatgcaggcgatgtacagctcagtgatc
ccaggtaaccgcttgtctggtcatatgactggtcagatccagttccctgcctggctcggg
aagaactcccgcgccaccaagatgaaacgcctctgtcaggagatacatgcacatactcga
ctcaggtatcaggtgaaagcggcaatgactcgatcatacaacaagaaagcgaccgctcta
ccgtacgcgccgggcgccgtcaagaaagggagagccaaagctgatgatgaattcggagac
gatgaccaagaggaagaagaggaaaataatgacagtgaccctgagaatgatgcgttaatt
aagaaaaagaaaagtaaagatacagagaaaccaacgacaagtaaaggcaaggctacatcc
aaagcgtcgacgggtaaaaagaaaaaagagaaatag
DBGET
integrated database retrieval system
