Spodoptera litura (tobacco cutworm): 111357281
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Entry
111357281 CDS
T08157
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111357281
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sliu03019
]
111357281
Messenger RNA biogenesis [BR:
sliu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111357281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
111357281
NCBI-ProteinID:
XP_022827675
UniProt:
A0A9J7IYA7
LinkDB
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Position
2:10134298..10140121
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AA seq
493 aa
AA seq
DB search
MADAAVETAPGDENDDSWLYGESNPDQITDKPSEDAEKEKDQADIADTANENEDKDQEDN
EAADDHFNDEHFAEVAREGDDRNGDGDSQNNGDSDSDDSDDIKVTIGEIKSGPQAYASLN
IKRGVGLVATGAAEKPRTGTTTGGKVTLDDLDGPGSINGVPALEFNIDTIEDKPWNKPGA
DISDYFNYGFNEVTWSAYCERQRRMRVNEAGVGLHVGAPPRPPAPDLRRPPGLGRNDEMA
PPSMANNYQSRENTIQVMTAERREYGRSGHQREMGAPEYFGPPPNDHYFQPPPHAPYEEP
WGHPEQSGWAPSEIKELTPGPMGPPVGPPMNMGQPLGPPHMSAPPHMMAAPPYVSPYRPH
PPPHMHDRDRDRDRDRERDRDRDRMRERDDRDRRDRDRRDEEDRERDRDRERDRSRSIKP
DRIREKSYRRERSRSRSRRHKSRSRSPRPRERSRERDRSRERERDRSRDRERSRDRERSV
KPKTKDKEKDEDK
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgctgctgttgaaacagcacctggagatgaaaatgatgatagttggttatat
ggtgaatctaatcctgatcagataacagacaaaccttcagaagatgctgaaaaagaaaag
gatcaagctgatatcgctgacaccgcaaacgaaaatgaagataaggatcaggaggataat
gaagctgctgatgatcattttaacgacgaacatttcgcggaagttgcgcgtgaaggagat
gatcgcaatggagacggagatagccagaacaatggagactctgactccgacgacagtgat
gacataaaagttaccatcggagagattaaatcaggaccccaggcttatgctagtctcaat
ataaagcgaggtgtaggtttagtagccactggtgctgcggagaaacctcgcactggtacc
actacaggtggcaaagtaactctagatgacttggatggtcctgggagtatcaatggagtg
cccgctttggaatttaacattgatactattgaagataaaccttggaacaagcctggagct
gatatttctgattatttcaactatggtttcaatgaagtaacttggagcgcatactgtgag
cgacaacggcgcatgcgtgtgaatgaggcgggcgtaggtttgcatgtgggagcgcctcct
cgtcctccggcacctgacctcaggagacctcctggtctcggaagaaatgatgaaatggca
ccaccatcaatggcaaataattaccagtctagagaaaatactatacaggtgatgacagcg
gaacgtcgtgagtacgggcgcagtggtcaccagcgagaaatgggtgcgcctgaatatttc
gggcctcctcccaacgatcactacttccagccgcctccacatgctccctacgaggaacca
tggggccatccggaacagagtggctgggcgccaagtgagatcaaggaactgacgccaggt
ccgatgggtcctccggtcggtccgccgatgaacatgggccagccactaggtccgccgcac
atgtcagcgcccccgcacatgatggcggcgccgccgtacgtgtcaccgtaccgaccgcac
ccaccgcctcacatgcacgaccgcgaccgcgaccgggaccgtgatcgtgaacgggatcgt
gacagagatcgcatgcgagagagggacgaccgtgataggagagaccgtgacaggagggat
gaggaggacagggagagagatagagacagggaacgagatcgctcacgttccatcaaacct
gaccggataagagagaaatcgtatagacgggaacggtcgcgttcgaggtctcgtcgtcac
aaatctcggtcccgttcaccgagaccgcgcgaacgatctagagaacgagatcgttctcgt
gaacgggaacgagatcgttctagggaccgcgaaaggtcacgcgatcgagaacgcagtgta
aagcctaagaccaaggataaggaaaaagacgaggacaaatag
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