Spodoptera litura (tobacco cutworm): 111357676
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Entry
111357676 CDS
T08157
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
111357676
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sliu03400
]
111357676
DNA repair and recombination proteins [BR:
sliu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
111357676
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
DUF724
Motif
Other DBs
NCBI-GeneID:
111357676
NCBI-ProteinID:
XP_022828232
UniProt:
A0A9J7EGU9
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Position
25:complement(6437868..6458620)
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AA seq
916 aa
AA seq
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MSSLQPIHALSLDSVQQQAFVKYFQSLPEKPATTVRIFDRNDYYSVHGSDATTAAREVFS
TVANIKKMGIEPNRLDYLVLSKGNFEILIKKLLLVRRYRVEIYVAEGSVKGSDWSLKYKG
SPGYLSQLEEILGEGLGTSDDTTPCLMAVHIKTDAVTKGRLLGVACITAGDYQMSVTEFT
DDDLLTELETITVQMAPSECLVPISEHDDYKALKKVMERTNVTLTKLKKAEFSTEGLIQD
LNRLLKFKENQQQDANAFPETRKEVAMTCLAAAIKYSALLNDSTNFARFHLSTIQADCFL
HLDSAALSALNVFPELGDTSNAPSRSLYGLLDKCRTQQGKRLLAQWLRQPLRDLNLINER
LDIVEMLMSNSQLRLQLHEDHLRRIPDLQALARRLTRKKANLQDCYRIYQAIKRLPSLLR
CLAEAENATVHSSITEPISELNEDLGKFLEMIETTVDMEAVDRGDFLVKPSFDEQLQSLY
EQLEQMQSSADRELNKAARDLGLDAGKTIKLESNPQHGFCFRVTLKEEQSLRGNKKYTII
DAVKGGVRFKTKALENITDEYTTAKSMYEKEQDKVVAEIVGIAAGYSECLFCLSHILSRL
DVLVSFAVASSIAPIPYIRPTLTEDNNEMVMEGLRHPCLEVAEGVSYIPNDVVFKRGEGI
LHIVTGANMGGKSTWMRSCGAACVLAHAGCPVPAARATIPRLRALAARIGASDAEGQGHS
TFMREMIDTAAILRTATADSLVLIDELGRGTSTYEGCGIAWAIAEELATKSQCFCLFATH
YQELTRLASSHPGVIVNSHAEASVLNGQLLLLHRIVPGPALHSLGLHVAKLADLPDSIIK
YAETKQAQLEINLFDVEAAVKSTETKEGQKLIVDFLRKCKQVQEETTSDDIMMKEIAKLK
QELLQSNNKYVESLMA
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcgttacaacctatccacgcacttagtttagattcggtccagcagcaagctttt
gtcaaatattttcagtctctacccgagaaacctgctacgacggtgaggatttttgaccgc
aatgattactacagcgtccatggaagtgacgcaacaactgctgcgagggaagttttttcc
accgtagcgaatattaagaagatgggcattgaacccaatcgccttgactatctagtactg
tcaaaaggaaactttgaaatactaataaaaaagctactactggtgaggcgttatagagta
gaaatatatgtagccgagggttctgtgaaaggaagcgactggtcgctgaaatacaaaggc
tcacctggttacctgtctcagttggaagaaatcctcggcgagggattgggaacatcggat
gacacgacaccatgtttgatggctgttcatataaagacagatgcagttaccaaaggtcga
ctcctaggcgtagcatgcatcacagccggtgactaccaaatgtctgtgacggagttcacc
gatgacgacttactcacggagctagaaactatcacagtacaaatggcgccttccgaatgt
cttgtaccaattagtgaacacgatgattataaagctttaaaaaaagttatggaaagaaca
aatgtaaccttaacaaaattgaagaaggctgaattttcaacggaaggacttattcaagat
ctgaatcggttgcttaagtttaaggagaatcaacaacaagatgccaacgctttcccagag
acaagaaaagaggtcgctatgacctgtttggctgctgctattaagtactctgccttgtta
aacgatagcactaattttgcaaggtttcatttatcaactattcaagctgattgcttccta
cacttagattctgcagcattgtcggctctcaacgtttttcctgaacttggagacacgtcg
aacgcaccgtcaagaagtctgtacggcctattagataaatgtcgtacgcaacagggcaag
cgacttttagcacaatggcttcgacagcctcttcgggacttaaacttgatcaacgagcgt
ctggacatcgtggagatgttaatgagcaactcccagcttcggttacagctacatgaagat
caccttagaaggatacctgacctccaagcattggcgagaagacttaccaggaagaaggcc
aatctacaagactgctatagaatatatcaggctatcaaaaggctaccgtcactgctgcgc
tgtctagctgaagctgagaatgcaacagtacattcatctatcacggaacccatatcggaa
ctgaatgaggacctcggcaagtttctggagatgatcgaaactaccgtcgatatggaagct
gttgatagaggcgatttcctcgtaaaaccgtcgttcgatgagcagcttcaaagtttatat
gagcagttggaacaaatgcagtcctcagctgatagggaactgaacaaggctgccagggat
ttgggccttgatgctggaaaaactatcaagctagaaagtaatcctcaacatggattttgt
tttagagtaacattgaaggaagaacagtcactacgtggaaacaagaagtacacaataata
gatgcagtgaaaggaggtgttcgattcaaaactaaagcattggagaatatcacagatgaa
tatactacagctaaatctatgtacgagaaggaacaagacaaagtagtcgctgagattgtg
ggcatagcagctggatattcagaatgtttattctgtttatcccatattttatctcggctg
gacgttctagtatcgttcgcagtggcttcttctattgctcccataccgtacatacgtcct
actttaactgaggataataatgaaatggtgatggaagggttgcgccatccctgtctagag
gtagctgaaggcgtatcttatatacccaacgatgttgttttcaaaagaggtgaaggtatc
ctacacatagtgacaggcgccaacatgggaggtaagtccacgtggatgaggtcgtgcggc
gcggcctgcgtactagcgcacgccgggtgtccagtacccgccgcacgagccacgatacca
cgcctgcgcgctctggccgcacgtatcggtgctagtgacgctgaaggacagggacatagt
acctttatgcgggagatgattgacactgcggccatattacggactgcaacggcagattcg
ctcgttttgatagacgaattggggcgaggtacttcaacatatgagggatgtggaatagca
tgggccatagccgaagaattagcaacaaagagccaatgtttctgtctgttcgcgacgcac
taccaagagctaacgcgactggcgagttcccatcctggcgtcatcgtcaactctcacgcg
gaggcgtcggtccttaacgggcaactcctgctactgcatcgcatcgttcccggccctgca
ttgcactcgttgggattacacgtcgctaaactcgcagatctacccgattctatcattaag
tatgctgaaactaaacaagcgcagctagaaattaatttgttcgacgtagaagcagctgtg
aaatcaacagaaacgaaggagggacagaaattaatcgtagacttcttgcgtaaatgtaag
caggtacaagaagaaacaacttcagatgatattatgatgaaagaaattgcaaaactaaag
caagaattgttacaatctaataataagtatgtcgaatctctcatggcttga
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