Spodoptera litura (tobacco cutworm): 111358837
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Entry
111358837 CDS
T08157
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111358837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sliu03021
]
111358837
03041 Spliceosome [BR:
sliu03041
]
111358837
03036 Chromosome and associated proteins [BR:
sliu03036
]
111358837
Transcription machinery [BR:
sliu03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
111358837
Spliceosome [BR:
sliu03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
111358837
Complex B
111358837
Complex C
U2 SnRNP specific factors
111358837
Chromosome and associated proteins [BR:
sliu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
111358837
TFTC complex
111358837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_BBS7
Fungal_virus_P2_N
Motif
Other DBs
NCBI-GeneID:
111358837
NCBI-ProteinID:
XP_022829922
UniProt:
A0A9J7EL18
LinkDB
All DBs
Position
28:5605979..5614716
Genome browser
AA seq
1218 aa
AA seq
DB search
MYLYNLTLQGSSSITHAVHGNFSGTKQQEIVISRGKTLELLRPDPNTGKVHTLMKVEIFG
VIRSMMSFRLTGGTKDYIVIGSDSGRIVILEYIPKKNILEKVHQETFGKSGCRRIVPGQY
LAIDPKGRAVMIGAIEKQKLVYILNRDAEARLTISSPLEAHKSNTLVYHMVGVDVGFENP
MFACLEIDYEEADADPSGEAAQKTQQTLTFYELDLGLNHVVRKYSEPLEEHANFLITVPG
GNDGPSGVLICSENYLTYKNLGDQHDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITIETDEDMVTEIKLKYFDTVPVATAMCVLKTGFLFVACEFGNHYLYQ
IAHLGDEDDEPEFSSAMPLEEGDTFFFAPRPLRNLVLVDELDSLSPILACKVADLAAEDT
PQVYLACGRGPRSSLRALRHGLEVAEMAVSELPGSPNAVWTVRRHKDEEYDSYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCHALGADALVQVYPDGIRHIRADKRVNEWKAPG
KKSIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKKLSSDVSCMALGSVATGEQ
RAWFLAVGLNDNTVRIISLDPSDCLAPRSMQALPAGAESLCIVEQPFESGAKSALQLNIG
LSNGVLLRTTLDSVSGDLADTRTRYLGSRPVKLFKVRVQAAEAVLAVSSRTWLGYHYQNR
FHLTPLSYECLEYAAGFSSEQCAEGIVAISSNTLRILALEKLGAVFNQTYLPLEYTPRKF
VINSDNNNIIILETDHNAYTEEMKNQRRVQMAQEMREAAAGGGPEEQQLANEMADAFLSD
TLPENIFSSPKAGAGMWASQIRVVDMGVSGGQPTTLFKLPLEQNEAAVSGCIVRWAAHAE
HAQAHLVVGVAKDMILSPRSCTEGSLHVYKIYGNTGKLELIHKTPVDEYPGALAPFNGRL
LAGVGRMLRLYDIGRRKLLRKCENRHIPNLIADIKTIGQRIFASDVQESVFCLKYKKREN
QLIIFADDTNPRWITNSCILDYDTVAMSDKFGNVAVMRLPQSVTDDVDEDPTGNKALWDR
GLLNGASQKGDVVVNFHVGETVTTLQRATLIPGGSEALLYATVSGSLGVLLPFTSREDHD
FFQHLEMHMRSENPPLCGRDHLSFRSYYYPVKNVIDGDLCEQFNSLEPAKQKAIAGDLER
TPAEVSKKLEDIRTRYAF
NT seq
3657 nt
NT seq
+upstream
nt +downstream
nt
atgtatctctacaatttgactttacaaggttcatcgtctatcacacatgccgtacacgga
aatttctccggtaccaagcagcaggagatagtgatatcgcgtgggaagacgttggagctt
cttcgtccggatccaaacaccggcaaagtgcatacactaatgaaggtggaaatattcggc
gttatcagatctatgatgtcatttcgcctcaccggtggcactaaagattacattgtaatt
gggtcagattccggtcgtattgtgatattagagtatattccaaagaaaaacatccttgaa
aaggttcaccaagagacatttggtaaatcaggatgccgcaggattgtacctggccaatat
ttggccattgaccccaaaggcagagctgttatgattggtgcaattgaaaagcagaagcta
gtatatatattgaacagagatgcagaagccagactcacaatttcctcaccattggaggca
cacaagtctaacacattagtctaccacatggttggagttgatgtcggctttgaaaatcct
atgtttgcctgcttagagattgattatgaagaagccgatgctgatccttcaggtgaagca
gctcaaaagacacaacagactctcacattttatgagttagatttaggtttgaaccatgtg
gtcagaaaatattctgaacctcttgaggagcatgcaaatttccttataactgtgccagga
ggtaatgatggaccatctggagtacttatttgctcagagaactatctaacatacaagaat
ttgggtgaccagcatgacattcgatgtcctatccctcgacgccgaaatgatttggatgat
cctgagagaggtatgattttcgtgtgctcagcaacacataaaaccaagtctatgttcttc
ttcctggcacaaactgaacaaggagacattttcaagatcaccattgagacagatgaagac
atggtcactgagatcaagttgaagtactttgacactgttcctgtggctacagctatgtgt
gtgctcaagactggcttcctatttgtagcttgtgaatttggcaaccactacctataccaa
attgcacacttaggtgatgaagatgatgagcctgaattcagttcagctatgcccttggaa
gaaggtgacacattcttctttgctccaagaccactaagaaatctggtactggttgatgaa
ttggattctctatcacccatattagcttgtaaagttgctgatttggctgcagaagatact
cctcaagtatatctggcctgcggtcgaggaccaagatcttcactaagagctcttagacat
ggtttagaagtagccgagatggctgtctctgagttgcctggttcacctaatgcagtatgg
actgtcagaagacacaaggatgaggagtatgattcttacatcattgtgtcgttcgtaaat
gccacacttgtgctgtctattggtgaaacggtcgaggaagtcacagactctgggttcctg
ggcactacccctacgcttagctgtcacgcgctgggcgcagacgcactcgtgcaagtgtac
ccagacggcatcaggcacattcgagctgacaagcgtgtgaatgaatggaaggcaccaggg
aaaaagtcgatcgtaaagtgcgcagttaatcagagacaagtagttattgctctgacagga
ggagaattggtttattttgaaatggaccctactggccaattaaatgaatatacagagaga
aaaaagttgtcatctgatgtatcttgcatggcactgggatctgtggccactggtgaacaa
agggcttggttcttggctgttggactaaatgataacaccgtcaggattatctctttagac
ccatcggattgtctagcacctcgctcaatgcaggctttgccagccggcgcggagtctttg
tgtattgtggagcaaccattcgagtctggtgccaaatctgcactacagctaaacatagga
ctgagcaatggagtactattgaggactaccttggactccgttagtggtgacttagctgat
actaggactaggtacttggggtcgaggccagtgaaattgtttaaagtacgcgtgcaggct
gctgaggcagttttagctgtatcgtcaagaacttggcttggctaccactaccaaaatcgt
tttcacctcacccctctatcatatgaatgtttggagtatgcagcaggatttagttctgag
caatgtgccgaaggtatcgtcgccatctcctccaacaccctcagaattctggcgcttgaa
aaactaggtgctgtgttcaatcagacatacttgcctcttgaatatacacccagaaaattc
gttattaattctgataacaacaacataatcatccttgagactgaccacaatgcatatact
gaagaaatgaagaatcaaagaagggttcaaatggcgcaagagatgcgtgaagctgctgca
ggtggaggtcctgaagaacagcaacttgcgaatgaaatggcagacgcttttctctctgat
actctacctgaaaacatcttctcgtcgcctaaagcaggagcaggtatgtgggcctcacaa
atccgcgtagtagatatgggtgtcagtggcggtcaaccgaccacgttgttcaagctacca
ctggagcagaatgaggcggccgtgtccggatgtatcgtgcggtgggccgcgcacgcagag
cacgcacaagcccacttagttgtgggggtcgctaaagacatgatcctgtcacctcgatct
tgcacggaaggcagtttacatgtgtataagatctatggcaacacgggaaaactagagctt
attcacaaaactcctgtagatgaataccctggagctctggcgccatttaacggaagactg
ctagcaggagtagggcgaatgttaagactgtacgacattggtaggcgaaaattgttgcgc
aaatgcgaaaaccgacacattccaaaccttatagctgatatcaagactattggtcaaaga
atttttgcatcagatgtacaggaatcagtgttctgtctgaaatacaaaaagagagaaaat
cagctgatcatatttgcggatgatacgaatccacgatggatcacaaacagttgtatattg
gactatgatacagttgccatgtctgataaatttggcaatgttgctgtaatgagattacca
cagtctgttactgatgatgtagatgaagaccccaccggaaacaaagctctctgggataga
ggtcttctgaatggagcttctcagaaaggtgacgtcgttgtcaatttccacgtgggggag
acggtaacaacgctgcaaagggctaccctcatccccggtggttctgaagcgctattgtac
gcaaccgtcagcggctccctcggcgtgcttcttccatttacctcccgagaagaccacgac
ttcttccagcatctggaaatgcacatgagaagtgaaaatccaccactgtgtggtcgggat
cacttatcatttaggagttattattacccagtaaagaatgtgatagacggagacttatgc
gagcagttcaactcgttagagccagctaaacaaaaggcaattgctggcgacctggagaga
acgcccgctgaagtatccaaaaagttagaagacattagaactagatatgcgttttaa
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integrated database retrieval system
