Spodoptera litura (tobacco cutworm): 111358841
Help
Entry
111358841 CDS
T08157
Name
(RefSeq) ATP-dependent RNA helicase p62
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111358841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sliu03041
]
111358841
03009 Ribosome biogenesis [BR:
sliu03009
]
111358841
Enzymes [BR:
sliu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111358841
Spliceosome [BR:
sliu03041
]
Complex A
U1 snRNP components
U1 related factors
111358841
Complex B
111358841
Ribosome biogenesis [BR:
sliu03009
]
Eukaryotic type
Pre-60S particles
Helicases
111358841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
DUF6426
Motif
Other DBs
NCBI-GeneID:
111358841
NCBI-ProteinID:
XP_022829930
UniProt:
A0A9J7EFK5
LinkDB
All DBs
Position
28:8093416..8097726
Genome browser
AA seq
556 aa
AA seq
DB search
MSNNWNNSRGGSGGSKFSGERKFGSSNGSRFGNGGSKFGGNGGSGGRFGGSGGGFGGGGG
KKDFTGGQNMRRPNWDSMSLQPFNKDFYNPHPTVLSRSPYEVEEYRSKHEITVSGVEVPN
PIQNFEEANFPDYVNQSISNMGYKDPTPIQAQGWPIAMSGKNLVGIAQTGSGKTLAYILP
AIVHINNQPPIRRGDGPIALVLAPTRELAQQIQQVASDFGNSAYVRNTCVFGGAPKREQG
RDLERGVEIVIATPGRLIDFLEKGTTNLQRCTYLVLDEADRMLDMGFEPQIRKIIEQIRP
DRQTLMWSATWPKEVRKLAEDYLGDYLQINIGSLQLSANHNILQIVDVCQEHEKENKLNV
LLQEIGQSQEPGAKTIIFVETKRKVENITRNIRRYGWPAVCMHGDKTQQERDETLYQFKQ
GRASILVATDVAARGLDVDGIKYVINFDYPNSSEDYIHRIGRTGRSKSKGTSYAFFTPSN
SRQAKDLVSVLQEANQVVNPQLQTMADRCGGGGGWNRNRYGGGRGGGGGSFKRGSNFGRG
NGGSNGGGHKRFNSDY
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataattggaacaatagccgtggtggtagcggtggttccaaattcagtggagaa
aggaagtttggaagcagcaatggctcccgatttggtaacggcggatcaaagttcggtggt
aatggaggaagtggtggtagattcggcggatctggtggcggttttggaggcggtggcggt
aaaaaagattttaccggcggtcaaaacatgcgccgtccaaattgggattccatgtctctt
caaccattcaacaaagatttctacaacccacacccaacagttctaagccgatcaccttat
gaagttgaagagtatagaagcaaacatgagattactgttagtggagttgaagtccctaac
cctattcagaattttgaagaagcaaacttccctgattatgtcaatcaaagcataagcaac
atgggttacaaagatcctactcctattcaagctcaagggtggcctattgccatgtctggc
aagaatttggttggtattgcacagactgggtcaggtaaaactcttgcttacattctacct
gctattgtgcatatcaataatcaaccccctattaggcgtggagatggccccattgctttg
gtacttgcaccaacaagggaattggcacaacagatccaacaagttgcttcagactttggg
aactctgcctatgtacgtaacacttgtgtatttggtggtgcacccaaaagggaacaaggc
cgtgacttggaacgcggagttgagatagtaattgccacacctggcaggttgattgatttc
ttagaaaagggtaccaccaatctacaaagatgcacatatttggtcttggatgaagctgac
cgaatgttagacatgggttttgaaccccaaattagaaaaattattgagcagattcgccct
gatagacaaactttgatgtggtctgcaacatggccaaaggaagtacggaagttggctgag
gattacttgggagattacctgcaaattaacattggttcccttcaattatcagccaatcac
aacatcttgcaaattgtagatgtttgccaagaacatgaaaaggaaaataaattaaatgtt
ttattacaagaaattggacagagccaagagcctggtgccaaaacaattatttttgtagaa
actaagaggaaagtagaaaatatcactaggaatatcagacgatatggatggcctgcagta
tgcatgcatggggacaaaacccaacaagagagagatgaaacattatatcaatttaaacaa
ggacgtgccagtatacttgttgcaacagatgttgcagccagaggacttgatgttgatgga
attaaatacgttattaactttgattatccaaactcatcagaggattacattcaccgaatt
ggtagaacaggacgttcaaaatcaaaaggcacttcctatgcctttttcaccccatctaac
tctcgtcaagccaaagaccttgtgtctgtacttcaagaagccaatcaggtggtgaatcct
caactccagaccatggctgatcgctgtggtggaggtggaggctggaacagaaacagatat
ggaggcggtcgcggtggcggcggcggctcattcaagcgtggaagtaatttcggaaggggc
aatggaggaagcaatggtggtggccacaagagatttaacagtgactattaa
DBGET
integrated database retrieval system
