Spodoptera litura (tobacco cutworm): 111358996
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Entry
111358996 CDS
T08157
Name
(RefSeq) ATP-dependent RNA helicase p62-like
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111358996
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sliu03041
]
111358996
03009 Ribosome biogenesis [BR:
sliu03009
]
111358996
Enzymes [BR:
sliu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111358996
Spliceosome [BR:
sliu03041
]
Complex A
U1 snRNP components
U1 related factors
111358996
Complex B
111358996
Ribosome biogenesis [BR:
sliu03009
]
Eukaryotic type
Pre-60S particles
Helicases
111358996
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
111358996
NCBI-ProteinID:
XP_022830172
UniProt:
A0A9J7EKK0
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All DBs
Position
28:8103791..8106607
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AA seq
536 aa
AA seq
DB search
MAMNILPRLLTRRGLRKILSEGTKLAGAEVVSVSLLNNICIPYSTVNHEHLLRQFRSKTQ
YYQKYYSIKAAHQSVVDDYRNEHNITCIGEDIPNPYIEIEKSEFPEYIKSFLKNQGFEKP
TIIQSQGWPIALSGQNFVGIAQTGTGKTLAYLLPAVVHIKEKNARKGLGPIVLVLAPTRE
LARQIEQVAKAFERSMKIKTLCVYGGASRAVQASKLQEGVDILIATPGRLNDFIMSKTVS
LSRSTYVVLDEADRMLDMGFEPQIRQALEGVPLERQILMFSATWPKEVRHLAKDYLGEFV
QVNVGSTELSANHNIKQNVHICDTDNKMTLFQSIMHEISGEGFGKLLIFANTKKFVDTLA
LTLRRNGWPADGIHGDKTQAQRDKIINKFKHGHANILVATDVAARGLDVDGVTHVINYDY
PNTSEDYIHRIGRTGRHENKGVSHTILTDEDSRQASSLIEVLKEANQEIPQDLEDLARSY
DISKIKEKQMKARPRQNNYQYGQNNRSYFQYGQSNKFNRFNKFKSFKSKRYDDDYV
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgaatatactgccaaggctcctgactcgacgaggtttacgtaaaatattatca
gagggcacaaagctagctggtgctgaagttgtttcagtcagcttactgaacaatatctgt
attccttattcaacagtcaaccatgagcaccttttaagacaattcagaagtaaaacacaa
tactatcaaaagtattattctattaaagcagcacaccaaagtgttgtagatgattatcgc
aatgaacacaacatcacttgcattggagaagatatacctaacccatacatagaaatagag
aagagtgaattcccagaatatatcaagtcatttttaaaaaatcagggtttcgagaaacca
accattatacaatcacaaggatggcctattgctttgagtggtcagaattttgtaggaatt
gcacaaaccgggactggcaaaacattggcttacttgttaccagctgttgttcacattaag
gagaaaaatgcaaggaaaggcttaggtcctattgtgctggttcttgcaccaacaagagaa
ctagctcgacaaatagaacaggtggcaaaagcttttgaaagatccatgaaaattaaaaca
ctctgtgtttatggtggagccagtcgtgccgttcaagctagtaagctgcaagaaggagtt
gatatacttattgctactcctggcagattaaatgactttattatgagcaaaaccgtctca
ttgagtcgatcaacttatgttgtattagatgaagctgataggatgttggacatgggtttt
gaacctcaaatacggcaagctttagaaggagtccctctggagagacaaattttgatgttt
tctgccacttggcctaaagaagtgagacatctagctaaagactacttgggagagtttgtg
caagttaatgtagggtccactgaactgtctgcaaaccacaatataaagcaaaatgtccat
atatgtgacacagataacaaaatgaccttgtttcaatctataatgcatgagatttctggt
gaaggatttggtaaactgttaattttcgcgaacactaagaagtttgttgatactctggct
ctcacactcagaagaaatggttggccagcagatgggattcatggcgataagactcaggcc
caaagagacaaaattattaacaagtttaaacatggtcatgcaaatattttagttgcaact
gatgttgctgctcgaggacttgatgtggatggcgttacacatgtgatcaactatgactac
ccaaacacgtccgaagactacatccatagaataggccgcactggtcgtcacgaaaacaaa
ggggtgtctcacactatcctcactgatgaggactcgaggcaagccagcagtttgattgaa
gttctcaaagaagctaaccaggaaattccacaggacttagaagacttagctcgttcatat
gatatatcaaaaataaaagaaaaacagatgaaggccaggcccagacaaaataactaccaa
tacggacaaaataacagaagttacttccaatatggtcaaagcaacaagtttaacagattc
aacaaattcaaaagctttaaatccaagagatatgatgatgattatgtgtaa
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