Spodoptera litura (tobacco cutworm): 111359095
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Entry
111359095 CDS
T08157
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111359095
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sliu03021
]
111359095
03019 Messenger RNA biogenesis [BR:
sliu03019
]
111359095
Transcription machinery [BR:
sliu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111359095
Messenger RNA biogenesis [BR:
sliu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
111359095
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCHC
zf-CCCH_2
zf-CCCH_3
zf-CCCH_4
zf-CCCH_RBM22
zf-CCCH_DUS3L
zf-CCCH_10
zf-CCHC_2
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
111359095
NCBI-ProteinID:
XP_022830301
UniProt:
A0A9J7EKF3
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All DBs
Position
28:453990..456418
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AA seq
293 aa
AA seq
DB search
MEVIVANVDHIKFDIDYALEEQYGALPLPFPGMDKSTAAVCEFFSQPGGCGNGPQCPYRH
VRGDRTVVCKHWLRGLCKKGDQCEFLHEYDMSKMPECYFYARFNACHNKECPFLHIDPES
KIKDCPWYDRGFCRHGPHCRHRHVRRVLCMNYLAGFCPDGSTCKYMHPRFELPAPPEQTK
DAKRLPVCHYCSEVGHKASSCSKIPAEQREAALRQEEARYRALGYIKPANENEVNEMNNQ
RMQRIVHKPLEEVTCFKCGTKGHYANKCPKGHLAFLSSQANQNQNANTFKKPN
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggaagttatcgttgccaatgttgatcatattaaatttgatatagattacgcgttagaa
gaacagtatggagcgctacctctacctttcccgggaatggacaagtcaaccgcggcagta
tgtgaattcttcagtcaacctggaggttgtggaaatggtcctcagtgtccttacagacac
gtccgaggagatcgtacggtcgtttgcaaacattggttgagaggtctctgtaagaaaggc
gatcaatgtgaattccttcacgaatatgacatgtccaagatgcccgaatgttatttctat
gccagatttaatgcttgtcataataaagaatgcccattccttcatattgaccctgagagt
aaaatcaaggattgcccatggtatgacagagggttctgtcgccatggaccacactgcaga
catagacatgtgcgacgtgttttatgcatgaactatctggctggattctgtcctgatggc
tccacctgcaaatacatgcacccaaggtttgagctcccagctcctcctgagcaaacaaaa
gatgctaaaagactgcccgtatgtcactactgctctgaagttggccataaagcttcgtct
tgtagtaagataccagcagagcaaagagaagcagctttaagacaagaagaagcaagatac
cgtgcactaggctacataaaaccagccaatgagaatgaagtgaatgaaatgaacaaccaa
aggatgcagagaatagttcacaaacctctggaagaagtcacctgcttcaaatgtggcacc
aaggggcattatgctaacaaatgccctaagggccacctagcattcttgtccagtcaagcc
aaccaaaaccaaaatgcaaacacatttaaaaaaccaaactag
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