Spodoptera litura (tobacco cutworm): 111359235
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Entry
111359235 CDS
T08157
Name
(RefSeq) ATP-dependent RNA helicase dbp2-like isoform X1
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111359235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sliu03041
]
111359235
03009 Ribosome biogenesis [BR:
sliu03009
]
111359235
Enzymes [BR:
sliu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111359235
Spliceosome [BR:
sliu03041
]
Complex A
U1 snRNP components
U1 related factors
111359235
Complex B
111359235
Ribosome biogenesis [BR:
sliu03009
]
Eukaryotic type
Pre-60S particles
Helicases
111359235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
Helicase_C_2
Cas3-like_C_2
SAM_DprA
Phage_Mu_Gp48
DUF371
Motif
Other DBs
NCBI-GeneID:
111359235
NCBI-ProteinID:
XP_022830468
UniProt:
A0A9J7EH84
LinkDB
All DBs
Position
28:complement(7826531..7835180)
Genome browser
AA seq
829 aa
AA seq
DB search
MQYNGFHNQHPIFRPRPDRNEQFGKVPFFNGMDFGGPKNFGPRNMGNKPNFRPRNDFNGM
RNEYHKNENVGNPGDFGGPKDFNKMKNNYNNQPLKKNDYDADKAAGGNMQFYANGKNDFG
GPKQGFPKNNFGPKNFNNQNGQQSFGPKKVFNPNNMNQQIDFNGKQRGKKTKHPGDSLVK
PMWDLSQLEPIQKDFYKPHANVEGRSDDDVQKFRVSKEITVSGNNIPRPNQIFDEGNFPD
HILNTIKEQGWAEPTGIQAQGWPIALSGRDMVGIASTGSGKTLAYMLPAAVHIVHQQRIQ
RGDGPIALILAPTRELAQQIQSVAQSYSAQGCIRNTCLFGGSPKGPQARDLERGVEIVIA
TPGRLIDFLERGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWP
KEIQALAEDFLNDYVKVNIGSLNLSANNNIKQIIEVCEEHEKEMKLTNLLKEISQERENK
VIVFVETKKKVDDIARAVRRKGHNALAIHGDKSQIERDAVLTEFRNGATSILIATDVAAR
GLDVEDVKFVINFDYPNSSEDYIHRIGRTGRCQQSGTAYTYFTPGDARQARGLLAVLRET
GQNPPPKLSEMARSNNNNSGRNRWQQRKENNSGASSPRQQQNNQWSNKMANTNPEENQNT
YQNRGGNPQAPRFSNQNQGNQAYRQNNYQQKQVPFPSPNVFESMGNYQGGYNNGYQNGYN
GQNGYGQQRPYNNMRNGGQQYRNNNAGNKTNGTGSSYGSPPPHFATPQHYPQMHPHHQEM
LDFYTSGGKFYGGGVGGGGPCGYQAAVGVSGPYAHLPPGPLLYAAPVQQ
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atgcagtacaacggattccacaaccagcatccgattttcaggcctcgaccagaccggaat
gaacaattcggtaaagtaccgttttttaatggaatggattttggagggcctaaaaatttt
ggacctaggaacatgggaaacaaacccaattttcgacccagaaatgactttaatggaatg
agaaatgaataccacaaaaatgaaaatgttggcaacccaggtgattttggtggcccaaaa
gactttaataagatgaagaacaattataacaaccaacctttaaagaaaaatgattatgac
gccgataaagctgcaggtggaaatatgcagttttatgccaatggaaaaaatgattttgga
ggaccaaaacaaggttttcccaaaaacaactttggccctaaaaatttcaacaatcaaaat
ggtcagcaaagttttggacctaaaaaggttttcaatcccaacaatatgaaccaacaaata
gatttcaatggcaagcaacggggtaagaagactaagcaccctggagacagcttggtgaaa
cctatgtgggatttatcccagcttgagccaattcagaaggatttctataagcctcatgcc
aatgtagaaggtcgttcagatgacgatgtccaaaagttccgcgtttctaaggaaatcacc
gtcagtggtaacaacattccacgccctaatcaaatttttgatgaaggtaacttccctgat
catatattgaacacaatcaaggaacaaggctgggctgaacccactggtatacaagctcag
ggttggccaattgctttgtctggccgtgatatggttggcattgcttcaactggatctggc
aaaacacttgcgtacatgctacctgctgctgttcatattgtgcatcaacaacgtattcag
cggggtgatggccctattgcacttattcttgcccctaccagggaattagctcagcaaatt
caatctgttgctcaaagttacagtgcacagggttgcattagaaacacatgcctatttgga
ggatcgcccaaggggccccaagctagagatttggaacgaggagttgaaattgtaattgcc
acacctggccgattgattgatttcttggaacgtggtacaacaaatttgcgtcgatgcact
tatttagttctggatgaagccgacagaatgctggatatgggttttgaaccacaaattcgt
aaaattattgaacagattcgtccagatcgccaagtcttaatgtggtcagctacatggccc
aaagaaatacaagctcttgctgaagatttccttaatgattatgtcaaagtaaacattggt
tcattaaatctgtctgctaacaataatatcaagcaaataattgaagtttgtgaagaacat
gaaaaagaaatgaagttgaccaacttgttaaaagagatttctcaagaaagagaaaacaaa
gtcattgttttcgttgaaactaagaagaaggtggacgatattgctcgtgcggtacgtcgc
aagggacataatgccctggcaatacacggggataaatctcaaatagagcgtgatgcagta
ttgacagagttcagaaatggtgcaactagtatactcattgccacagatgttgcagcacgt
ggtcttgatgttgaggatgttaagtttgtcatcaacttcgactaccctaattcctcagaa
gattatattcacagaattggtcgcactggacgttgccaacaatctggaacagcatacact
tacttcactcctggtgatgcccgtcaagctcgcggtttacttgcagtattgcgtgaaact
ggccagaacccaccacctaaattgagtgaaatggctcgtagtaacaacaataactctggt
cgcaatcgctggcaacaacgtaaagagaacaacagtggtgcgagttcacctcgccaacag
cagaataaccagtggagcaacaagatggctaatacaaaccctgaagaaaaccagaatact
taccaaaaccgtggtggcaacccacaagcccctcgattctcgaatcaaaaccaaggcaat
caagcctacagacagaacaactaccaacaaaaacaagttcccttcccaagccctaatgta
tttgaatctatgggcaactaccaaggtggttacaataatggctaccagaatggatacaat
ggacaaaacggatatggtcaacaacgcccatataataatatgcgcaatggcggacaacag
taccgcaataacaacgctggtaacaagactaatggtacaggctcgtcgtatggatcgcca
ccccctcactttgctacgccacagcactacccccagatgcatcctcaccatcaggagatg
ctagatttttatacatcaggtggcaaattttacggtggaggcgttggcggtggcggacca
tgcggttaccaagctgcagtgggtgtaagcggaccttacgcacatctgcctccgggccca
ttgctctacgcagctccagtgcagcagtaa
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