Spodoptera litura (tobacco cutworm): 111359718
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Entry
111359718 CDS
T08157
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm5
KO
K12624
U6 snRNA-associated Sm-like protein LSm5
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03018
RNA degradation
sliu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111359718
09123 Folding, sorting and degradation
03018 RNA degradation
111359718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sliu03019
]
111359718
03041 Spliceosome [BR:
sliu03041
]
111359718
Messenger RNA biogenesis [BR:
sliu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111359718
mRNA degradation factors
5'-3' decay
Lsm complex
111359718
Spliceosome [BR:
sliu03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
111359718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Hfq
LSM14
Motif
Other DBs
NCBI-GeneID:
111359718
NCBI-ProteinID:
XP_022831101
UniProt:
A0A9J7IXY2
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All DBs
Position
29:5732894..5733372
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AA seq
95 aa
AA seq
DB search
MTQTSLPNPNTLLPLELVDKCIGSRIHIIMKNDKEMVGTLQGFDDFVNMLLDDVTEYEST
PEGRKITKLDQILLNGNNIAMLVPGGEMPGDSYDG
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaacatcgctgcctaatcctaacacattgttacctctcgaacttgtggataaa
tgtattggttcccggattcatatcatcatgaaaaacgataaagaaatggtcggcacacta
caaggtttcgacgatttcgtcaatatgttactggacgatgtaacggaatatgaatccacg
ccagaaggtagaaaaataaccaaactagatcaaatcttactgaatggaaacaacatagca
atgctggtgcctggtggcgaaatgccgggtgattcttacgacggatag
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