Spodoptera litura (tobacco cutworm): 111359983
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Entry
111359983 CDS
T08157
Name
(RefSeq) RRP12-like protein isoform X1
KO
K14794
ribosomal RNA-processing protein 12
Organism
sliu
Spodoptera litura (tobacco cutworm)
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sliu03009
]
111359983
Ribosome biogenesis [BR:
sliu03009
]
Eukaryotic type
90S particles
Other 90S particles
111359983
Pre-60S particles
Other pre-60S particles
111359983
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
Cnd1
Motif
Other DBs
NCBI-GeneID:
111359983
NCBI-ProteinID:
XP_022831509
UniProt:
A0A9J7IZU8
LinkDB
All DBs
Position
30:complement(6324709..6346535)
Genome browser
AA seq
1378 aa
AA seq
DB search
MGKFRSKLKGKSKGKRWQKGQSSNSNPKIQKYRDMAKSRFFQENLGSTGLTQQAVSKHDA
MMTYGHASLKKKSDAENELLIAKELENMSMKSGDEGSETEYSESFKSGTYKTFQTFASDW
SQCSNVSFSKLLTRFDSNNGLHKEMLAVLAAVTEVIKEQGGKESTTEYFAALMETLKTSE
LEENAVAALTLVSMGIKNVPPAVLRKYFSMSAKIFVDILEKDELVQNGTMLRSAIGCLSV
LLRAQEYALWGDSSTMRVFESLLAFALHSKPKVRKAAQHAVTSVLRGSCFMIPSDDQKVK
VPKLHPGSNRVAEFCLSQIKAEALLAGHRIVLHTLTMLRDVLPVFSKDYIKSICEAILSL
MTHNNVYIKTCCLHTLHALFSSSKDTSNMTASLAVQLTRALMAARPPANDTGQVLAWAAV
LQQGYCCLANLDLNLCMPNLPAFVNICVSELWLSDVADINSASTNALKAIILDCVKLALD
SDETFIKHKSHVEAIFKSIGTGLDNPFNQAIRHVVMTIAVCFEIGNEKVANSLGPLLRKL
NDRRESHNFDNDKEVEYATGCAIKSLGPEFVLRIIPLRDGPENINLERSWLLPVLKEKIT
NSNLKFFATEILEMATFCRKRSRELTQMKDVPGSHTYELLCNQFWALLPSFCNSPKDIKD
SFKSIARVLGSVLKDNPEFRLSVMQALRKLITCSADNEEDKLELGRFAKNYLPILLNVYM
SPAKGSYAEGHRLAALETIQVYLTISDQTLREELFTNALQQLETSKENHFQREAILDIIR
TLVLYQTSERIAKLFDEWVYPLCETVLEDPKKHKKAKKENQMDTENGEGEKKSELKYKEK
SKLLEMEHKKAYRILEEIFKSDKESCKEFLKENYKKIKKLLMSSLNKVADSSKAARLRCI
EHLINTTPFLNAESKLLKSAIAESVICTKDINSKCRQCAFNLINSVGTVLKSQEGGMQAF
VNMLTSGLSAPLPRIVSATLRAIASALFNFSEDMGLETVQGLLETVVEHMTNNNREIVAA
CMSFLKVYTKVLPTDVLAGSLPVIFKSLSTMPEDCKRHSRLEIGYFLTKMMRKFGADTVE
KLIPPTDEVMLRRLRNIRKMDNRKKRQKENQNDQSDDSDTDMPIKGTSKTLEDILKDSDS
EMEFLDEEDDKPRPKVKKMTKAKGKNQAWIEDDPDNIVDLADVSASRKITATDPSRKQKA
SEVKAQKKKDGGFKTAPDGRLIITDDAFENDDDDNDTPRPSGDIDTDTDDTDAEEEDSKP
SKLLKPGAKRRYDDILSLKSGKSSRSRASTVTVGSKYKAGGKGIHRPLGSAASVASGAGS
EYRAKKAKGDVKKQGKHDPYAYLPLSRKNLNKRKKAQTSKQFKGVVKSKTKLGKNKKK
NT seq
4137 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatttagatcaaaactaaaagggaaatcgaaaggaaagagatggcagaaggga
cagtcgtcaaactccaacccaaaaatacagaaataccgggatatggcgaaatcccggttt
tttcaggaaaatctaggaagcaccggtttaactcagcaagctgtttcaaaacacgatgcc
atgatgacttatggtcatgcatctttgaagaagaagtctgatgcagaaaacgagttgctt
atagctaaggagctagagaacatgtctatgaagagtggagatgaaggttcagagacagaa
tattcagagtcatttaaatctggcacttataagacatttcagacatttgcctctgactgg
agccaatgttctaatgttagttttagcaaattgctgacaagatttgactcaaacaatgga
ctgcacaaggagatgttggcagtgttagctgcagtgacagaagtcatcaaagaacaagga
ggcaaggaatccaccactgagtactttgcagctctgatggagaccctaaaaacatcagaa
ttggaagagaacgctgtggcagcactgacattagtatctatgggtatcaagaatgtacct
ccagcagttttgaggaagtatttctcaatgtcagcaaaaatattcgtggacatcttggag
aaggatgaattggttcagaatgggacaatgttgcggagtgctataggatgcctctctgtg
ttgctgagggcgcaggagtatgctctctggggtgattcgtccaccatgagggtcttcgag
tctttacttgcgtttgcattgcattctaaacctaaggtacgtaaagctgcccagcatgcg
gtgacgtcagtactacgcggcagctgtttcatgatcccgtctgatgaccagaaagttaag
gtaccaaaactccacccgggatcgaaccgcgtagccgagttctgtttgtctcagatcaag
gctgaagctctgttggccggacatcgaattgtgttacatacactgacgatgcttagagac
gttctacctgtatttagcaaggattatatcaagtcaatatgtgaggcgatactatcccta
atgacacacaacaacgtgtacataaaaacgtgttgtctacacacactacacgcgttgttc
tcaagcagtaaagataccagtaacatgacagcgtcgctagctgtacaactgacgagggca
ttaatggccgcccggcccccagccaatgatacaggacaagtactggcttgggccgctgtg
ttgcaacaaggatattgctgtttggctaatctggatctgaacctgtgtatgccgaactta
ccagcgttcgtgaacatctgtgtctctgagctgtggctctctgacgtcgctgacatcaac
tccgcgtccacaaacgctttaaaggctattatactggactgtgtgaagttagccctggat
tccgacgagacatttatcaaacacaagtcgcatgtcgaagctatcttcaagagtatcggc
acgggactcgacaatccattcaatcaagctatccgccacgttgtgatgactatagctgtt
tgtttcgagatcggcaacgaaaaagtagcaaactcactgggacctctattgagaaaactg
aatgaccgtcgcgagagtcacaactttgacaacgacaaggaggttgaatacgctactgga
tgcgccatcaaatctttaggcccagaatttgtccttcgcataatacctttgagagatgga
ccagaaaatataaacttagaacgaagctggctccttcccgtactcaaagaaaagataaca
aattccaacctcaaattcttcgcaacagaaattctagaaatggcaacgttttgtcgcaaa
aggtctagagagttgacccaaatgaaggatgtccccggttcgcacacttatgagttgctg
tgcaatcaattttgggccttattgccctcgttttgtaatagtccgaaagatataaaagat
agtttcaaatctatagcaagggttttaggtagcgttttgaaagataacccggagtttagg
ttgtcagtgatgcaggctcttaggaagcttataacttgttctgccgataacgaagaagat
aagctagaattgggcaggtttgcgaagaattatttgccgattttattgaacgtgtacatg
tcgcccgctaagggaagttacgctgaaggacacaggctggctgctttggaaactatacag
gtataccttacaataagcgaccaaacactacgcgaagaactgttcactaacgccctccaa
cagttagaaacgtcaaaagaaaaccacttccaaagggaagcgattctagacatcataagg
acgttagtcctatatcaaactagcgagcgaatagccaaactatttgacgaatgggtatat
ccactgtgcgaaacagttttggaagatccgaaaaaacataaaaaagccaaaaaagagaat
caaatggacacagagaatggagagggagaaaagaagagtgaattaaaatataaagaaaaa
tcaaaacttctagaaatggaacacaagaaggcttataggatattagaagagattttcaaa
agtgacaaagagagttgcaaagagtttttgaaagagaattataagaagattaagaagttg
ctcatgtcgtccttgaataaggtcgctgatagcagtaaagctgctagattgagatgtata
gaacacttaataaatacgactccgttcttgaacgcggagagtaagttattgaagagcgct
atagcggaatctgtgatatgtaccaaggacatcaatagcaaatgtaggcagtgtgccttc
aaccttataaacagtgttggaaccgttctgaagtcgcaggaaggaggcatgcaagcattc
gtgaacatgttgacctcgggtctctcagcgccgctccctcgaatcgtcagcgctacactc
cgcgccatagcgtcagcattgtttaacttctcagaagacatggggctggagactgtccag
ggtctgctggagactgtggtggaacacatgaccaataacaacagggagatagttgctgct
tgcatgagttttttgaaggtgtacacaaaagtactaccaacagatgtcctggcgggcagt
ctaccagttatcttcaaatccctatctaccatgccagaagactgcaagaggcactcccgg
ctggagataggatacttcttaacaaaaatgatgaggaaattcggagctgatacagtggag
aaactaattccaccgactgatgaggttatgttgagaagattgaggaatattcgcaagatg
gataataggaagaagagacagaaggagaatcagaatgaccagtcagatgattcagacacg
gatatgccaatcaagggcacatcaaaaactttagaggacattctcaaagattctgactcc
gagatggagttcttggatgaagaggatgataagccgaggcccaaggtcaagaagatgacc
aaggccaagggcaaaaaccaggcctggatcgaggatgacccagataatattgtggacttg
gctgatgtttcagcttctaggaagattacagcaacggacccatcacgtaagcagaaggca
tcagaagttaaagcacaaaagaagaaggatggtggcttcaagactgcgcctgatggtaga
ctgatcatcactgatgatgcgttcgaaaacgacgatgatgataatgacacgccacgaccg
agcggggatattgacacagacactgatgatactgacgctgaagaagaagactcaaaaccc
tcaaaactactcaagcctggtgccaagcgccgctacgatgatatcctcagcttgaagagt
ggcaagtcaagcaggagtcgcgcgtccaccgtcactgttggatccaagtataaggcggga
ggcaagggtatccataggccgctaggatcagcagcatcagtagcgtcaggtgctggatcg
gaatacagagctaagaaggcgaagggagacgtgaagaaacagggcaaacacgatccctac
gcgtatctaccgctatccaggaagaatttgaataagaggaaaaaggcacagacatcaaaa
cagttcaaaggtgttgttaaatcaaaaacgaaattggggaagaataagaagaaatga
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