KEGG   Spodoptera litura (tobacco cutworm): 111360259
Entry
111360259         CDS       T08157                                 
Name
(RefSeq) ATP-dependent RNA helicase WM6
  KO
K12812  ATP-dependent RNA helicase UAP56/SUB2 [EC:5.6.2.7]
Organism
sliu  Spodoptera litura (tobacco cutworm)
Pathway
sliu03013  Nucleocytoplasmic transport
sliu03015  mRNA surveillance pathway
sliu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:sliu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    111360259
  09122 Translation
   03013 Nucleocytoplasmic transport
    111360259
   03015 mRNA surveillance pathway
    111360259
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sliu03019]
    111360259
   03041 Spliceosome [BR:sliu03041]
    111360259
Enzymes [BR:sliu01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     111360259
Messenger RNA biogenesis [BR:sliu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     111360259
Spliceosome [BR:sliu03041]
 Complex C
  Other components
   EJC/TREX
    111360259
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    111360259
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 Cas3-like_C_2
Other DBs
NCBI-GeneID: 111360259
NCBI-ProteinID: XP_022831913
UniProt: A0A9J7IX57
LinkDB
Position
30:837989..839726
AA seq 425 aa
MADNDDLLDYEDEEQADQQTADGATEAAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSENHVYVLVMCHT
RELAFQISKEYERFSKYMAGVRVSVFFGGMPVQKDEEVLKTACPHIVVGTPGRILALVNS
KKLNLKHLKHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCIA
LAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKEFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITMVSDENDAKILNEVQDRFDVNITELPEEIELST
YIEGR
NT seq 1278 nt   +upstreamnt  +downstreamnt
atggctgacaacgatgatcttctggactacgaagacgaggagcaggcagatcagcagacc
gctgacggggcgacagaagcggcgccaaagaaagaggttaagggatcctacgtatctatt
cacagctctggattcagagatttcctgttaaaacccgaaatattgcgcgccatcgtcgac
tgcggtttcgagcatccatcagaggtacaacatgaatgtattccacaagctgtccttggt
atggatatcctgtgtcaagctaagtccggcatgggaaaaaccgccgtttttgtattggcg
acactacagcagctggaaccttcagaaaatcatgtatacgtactcgtaatgtgccacacg
agagaattagctttccaaattagtaaggaatatgagcgtttctcaaaatacatggccggc
gtcagagtgtcggtgtttttcggtggtatgcccgtacaaaaggacgaggaggttctcaaa
actgcatgccctcatatcgtcgttggtacacccggcagaattctggctttagtgaacagt
aagaaactgaatttgaaacatttgaagcatttcatacttgatgaatgtgacaagatgcta
gaatctttagacatgagacgtgacgttcaggagatattcagaaacactccccacggtaag
caagtgatgatgttctctgctacattgagcaaagaaatcaggccagtttgcaagaagttc
atgcaggaccctatggaagtatatgtggatgatgaagccaagctgacattgcacggtttg
cagcaacattacgtgaaactcaaggagaatgagaagaacaagaagctatttgagttgctg
gatgtgttggagttcaatcaagtagtaatatttgtcaagtctgtgcagcgctgcatagct
ctagcacagctgctgacagaccagaacttccccgctattggtatacacagaaacatgact
caagacgagcgtctgtcacgttatcaacagttcaaggagttccagaagagaatcctagta
gccactaacttgtttggaagagggatggatattgagagagtgaatattgtgttcaactat
gacatgcctgaagactctgacacctaccttcatcgtgtggctcgtgctggtagatttggt
accaaagggttagctattacaatggtatcagatgagaacgatgccaagatcctcaatgaa
gttcaagatcgcttcgatgtcaacatcacggagttgccagaagagattgagctatcaact
tacatagaaggccgatag

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