Spodoptera litura (tobacco cutworm): 111360259
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Entry
111360259 CDS
T08157
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03013
Nucleocytoplasmic transport
sliu03015
mRNA surveillance pathway
sliu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111360259
09122 Translation
03013 Nucleocytoplasmic transport
111360259
03015 mRNA surveillance pathway
111360259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sliu03019
]
111360259
03041 Spliceosome [BR:
sliu03041
]
111360259
Enzymes [BR:
sliu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111360259
Messenger RNA biogenesis [BR:
sliu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111360259
Spliceosome [BR:
sliu03041
]
Complex C
Other components
EJC/TREX
111360259
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111360259
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
111360259
NCBI-ProteinID:
XP_022831913
UniProt:
A0A9J7IX57
LinkDB
All DBs
Position
30:837989..839726
Genome browser
AA seq
425 aa
AA seq
DB search
MADNDDLLDYEDEEQADQQTADGATEAAPKKEVKGSYVSIHSSGFRDFLLKPEILRAIVD
CGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSENHVYVLVMCHT
RELAFQISKEYERFSKYMAGVRVSVFFGGMPVQKDEEVLKTACPHIVVGTPGRILALVNS
KKLNLKHLKHFILDECDKMLESLDMRRDVQEIFRNTPHGKQVMMFSATLSKEIRPVCKKF
MQDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCIA
LAQLLTDQNFPAIGIHRNMTQDERLSRYQQFKEFQKRILVATNLFGRGMDIERVNIVFNY
DMPEDSDTYLHRVARAGRFGTKGLAITMVSDENDAKILNEVQDRFDVNITELPEEIELST
YIEGR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggctgacaacgatgatcttctggactacgaagacgaggagcaggcagatcagcagacc
gctgacggggcgacagaagcggcgccaaagaaagaggttaagggatcctacgtatctatt
cacagctctggattcagagatttcctgttaaaacccgaaatattgcgcgccatcgtcgac
tgcggtttcgagcatccatcagaggtacaacatgaatgtattccacaagctgtccttggt
atggatatcctgtgtcaagctaagtccggcatgggaaaaaccgccgtttttgtattggcg
acactacagcagctggaaccttcagaaaatcatgtatacgtactcgtaatgtgccacacg
agagaattagctttccaaattagtaaggaatatgagcgtttctcaaaatacatggccggc
gtcagagtgtcggtgtttttcggtggtatgcccgtacaaaaggacgaggaggttctcaaa
actgcatgccctcatatcgtcgttggtacacccggcagaattctggctttagtgaacagt
aagaaactgaatttgaaacatttgaagcatttcatacttgatgaatgtgacaagatgcta
gaatctttagacatgagacgtgacgttcaggagatattcagaaacactccccacggtaag
caagtgatgatgttctctgctacattgagcaaagaaatcaggccagtttgcaagaagttc
atgcaggaccctatggaagtatatgtggatgatgaagccaagctgacattgcacggtttg
cagcaacattacgtgaaactcaaggagaatgagaagaacaagaagctatttgagttgctg
gatgtgttggagttcaatcaagtagtaatatttgtcaagtctgtgcagcgctgcatagct
ctagcacagctgctgacagaccagaacttccccgctattggtatacacagaaacatgact
caagacgagcgtctgtcacgttatcaacagttcaaggagttccagaagagaatcctagta
gccactaacttgtttggaagagggatggatattgagagagtgaatattgtgttcaactat
gacatgcctgaagactctgacacctaccttcatcgtgtggctcgtgctggtagatttggt
accaaagggttagctattacaatggtatcagatgagaacgatgccaagatcctcaatgaa
gttcaagatcgcttcgatgtcaacatcacggagttgccagaagagattgagctatcaact
tacatagaaggccgatag
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