Spodoptera litura (tobacco cutworm): 111360525
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Entry
111360525 CDS
T08157
Name
(RefSeq) PAN2-PAN3 deadenylation complex subunit PAN3 isoform X1
KO
K12572
PAB-dependent poly(A)-specific ribonuclease subunit 3
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111360525
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sliu03019
]
111360525
Messenger RNA biogenesis [BR:
sliu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111360525
mRNA degradation factors
3'-5' decay
Pan complex
111360525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pan3_PK
Pkinase
Motif
Other DBs
NCBI-GeneID:
111360525
NCBI-ProteinID:
XP_022832235
UniProt:
A0A9J7J2M7
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Position
Z:complement(6694642..6712101)
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AA seq
617 aa
AA seq
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MSWLHRELETMDPSIFLQYSPSPPNGLPQESKLATYMNRSTSTPTRSLNQALGKLSLESS
PTAIKKVVITEFVPMNYFPPPSLLQPDSPESSSPSTMSAVPNTSQVHQENVGGTTYFYST
NSDSLNTSGALNSSTSIGPSESCLSGAVGGAASPYATQIYSGTPTHMGPMTSKQGLAASF
YMPETIRSEIYERNDDVFLQPDLRQYPDLPENVEMYSELTPLESIAPHCIATSYRATHRQ
SGEHYALRRLHSYSTSITKRLEMWKQIDHPNVVKLHDWFTTKAFGDHSMVLVYTYHPACT
TLMNKYLSGGAGNAVNDANGAFHDPFSSDPDAPRPYTHQKNAMLRAVASGALLPEAVLWS
LLVQLTAALRAIHTAGLACSSLDPTKVVMNGCRVRISWSGATDALHANSTDIAQAQQDDL
TALGRLALALACRTIHCDNLAASMELVARTYSADLKNLILYLLSSSTARRSVTDLMPMIG
ARFYTQVEALERRADVFEDQLAREIDNGRLLRILIKLGVVNERPELNLDASWSETGDRYM
LKLFRDYLFHSVTADGRPWLDQAHLAHCLNQLDGGTTARVELMSRDEQSVLVVSYAELKH
CLEQAFEEVMQAAAAEP
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgagttggctgcaccgtgaactggaaaccatggatccctcgatctttttacaatattca
ccttcccctccaaatggactaccacaagaatcgaagttggcaacctacatgaatcgttcc
acttctactcccacaagatccctcaaccaggctcttggcaaactcagcttggagtcttca
cctactgcaattaagaaggtggtgataacagaatttgttccaatgaactattttcctcca
cctagcctactgcagccagactctccagaaagttcttccccttctactatgtcagcagtt
cccaatacttctcaagtacatcaggaaaatgttggtggtactacatacttctattccacc
aactctgatagcctgaatacttcaggagccttgaattcctccacatccattggcccttcg
gagtcatgcttgagtggtgccgtgggcggcgcggcctcgccgtatgccacccagatctac
tctggaacgccaacccatatgggtccaatgacttcgaaacaaggtctggccgcgtctttc
tacatgcccgagacgatccgctctgagatttacgaaagaaacgacgatgtcttcttgcaa
ccagatcttcgccagtatccagatttaccagaaaacgtggaaatgtattccgaactgacg
cccttagagagtatcgcaccgcactgtattgcgacgtcataccgcgccacacaccggcag
agcggggaacattatgctctcaggcgcctacattcatactccacgtctatcacaaaacgc
ctggagatgtggaagcagattgaccatcccaacgtcgtgaaactacacgactggttcact
actaaagctttcggggaccactcgatggtactggtgtacacctaccacccagcgtgcaca
actttgatgaataaatatctgtccggtggcgctggaaacgccgtcaacgatgcgaacggt
gccttccacgacccgttctcctccgacccggatgcaccccgtccatatactcatcagaaa
aatgcgatgctccgcgcggtggcgagtggtgctttgctccccgaggctgtactgtggagt
ctccttgttcaactcacggcggcgctaagagcaatacacactgccggactagcgtgcagt
agcttggatcccacgaaggtggtcatgaatggctgtcgcgtgcgcatatcctggtccgga
gccaccgacgctctgcatgctaacagtactgatatcgcgcaggcacagcaagacgacctg
acggctctgggtagactcgcgctggcgctggcctgccgcaccatccactgcgacaacctc
gccgcctccatggagctcgtcgcgcgaacctactccgccgacctaaagaaccttatactg
tatttattatcgtcgtcgactgctcgccgctccgtcactgatctcatgccgatgataggt
gccaggttttacacgcaggtggaggcgctggagcgacgtgctgatgtatttgaagaccaa
ctggctcgcgagattgataatggaagactgctacgcatactcatcaaattaggagtagtt
aacgagaggcccgagttgaacctcgacgcatcttggtctgagactggtgaccggtacatg
ttgaaactgttccgggattacttgttccactcagtgaccgcagatggcaggccctggctc
gaccaggcgcatttggcgcactgcctcaatcaactcgatggcggtactacggctagggtg
gaactgatgtcgcgcgacgagcagagcgtgctggtggtgtcgtacgccgagctgaagcac
tgcctcgagcaggcattcgaggaagtgatgcaggcggccgccgccgagccctag
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