Spodoptera litura (tobacco cutworm): 111360592
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Entry
111360592 CDS
T08157
Name
(RefSeq) endoribonuclease Dcr-1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
sliu
Spodoptera litura (tobacco cutworm)
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sliu03036
]
111360592
Chromosome and associated proteins [BR:
sliu03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
111360592
microRNA pathway
RISC loading complex
111360592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Dicer_dsRBD
Ribonucleas_3_3
Dicer_dimer
Dicer_platform
PAZ
Helicase_C
Dicer_PBD
Motif
Other DBs
NCBI-GeneID:
111360592
NCBI-ProteinID:
XP_022832341
UniProt:
A0A9J7EPD5
LinkDB
All DBs
Position
3:complement(3905795..3965009)
Genome browser
AA seq
2604 aa
AA seq
DB search
MMMDACCSRFTAAEGGARLAAAASTKNILAVEYASFIPVRLLYEKAHQIRGSLFEGSKRS
IYITRASRVQVVAFELKILTDLGTVAAQTYDEVYDWMAELETKEVVICTSAVLKRILHEE
LLSMSNINVLIVDSCHLIYKDEDLKYIMRTYKECSKNDQPIILALTYPLFNSKKDSEDKK
ETAEQSEKEKQDTITTSEKETAQQSEKEKQEIISTSEKETAQQSEKEKQATITTSEKETA
QQSEEEKQDAIEKENTEDLTAPSSEGASETPNRIFERAKGTEIEEIGVYKNLDDFDMYEK
LEWKIEELEKELCCQMDLAEDIDGGKRMSASVSKPRELIIEYDGKPTEEQLPDIYRDLDK
YMRDTVQDALDFIEDHRHDPTEIYGDELYDEFMSIPDPTIDPKMVFKKFLYVLEQLGPYA
ADKAAFCLLNKLEKLKIKIPYERHFILMCLCTTVFIKIRCYAELVFNTIEDEWTRIKTFS
TPKILRFVEILEKFKPPESKNSTNVRSDCDSASIKPDADLDSKDDSDNTKKKEDNIKKLL
KDIESCDFNTLGDKIQDKVHIYETNLKELPNSKSDSDEKSDSTPESPKNQPNDIPNEFSE
PKSDNNDQLKSQPDGQQNSQPSVQDSQPATKIGMDHKGNEFLFQQRGLLGFTRRAGNRLR
GKSRMQRNNAARALQMQQNPDALCGIVFMKEPLIAKIMFMVIVDMSRCNPCLSYVCVQFC
ATESPADPGTEPRECLRQGKRQEDVLKKFRMHECNLLLATSALEEGIDLPRCNLVLRWDV
PPSYRSYGLCRGRGRAARSAAALLCSDSTDTTALLLHHVATYRELDQIISRKCGCGIQDE
PPQSEEDHADAFTTFVKPYSPNDNKNTNQKNTETVSDTVAIDDTDANDTLSTNDTEPISA
NDAFQINDAMSIDMNDAQPMNDAVDSICRNDVNIHNLDINNDLVELNDKIANDLKIDDNK
NQIDGVLPNKEGLDKDVISQNNETGEIELNPSTKDEKILENDVKSDISNKIAHKDIDVSS
KDKDMSSKDMSCKGYCNKCFNAKLNGVCLCTNVNLYYQLLAKSNNSNRGEHRKGQNEESF
ASVDLSTAIALINRYCGKLPSDTFTRLAPQWWTEEVELPVKGTGQVRPAYICTLRLPLNC
PVKYNIVGHPMPTKVLARRMVALQACRILHKSGELDNQLMPIGKENFRAVELEGVNNIGT
YTGNEPADAHDSARPGTTKRRQYYYKRTAWAFTDCQPVIDSTDEQIYPGVDPDTLDIHSD
VEATSQEEKKEGTRHKEGRRDAGKRNMLYAIVSKLWCALPERYNTRGRRLHAPQLASQAI
GILMARQEPDNLQIPSFPVYTRSGEVRVSVEHVAGADVRMSPRRAKLIRRFMRFVFAEVL
RVRRRGMKLQSEGSTHNNYYIVPTVKTVSPDGLHKIDIDWDFLELIYQHTEEKKASDLEK
PVLWQEMPEEEKSEKDSNRRRRGKKRMANPLLKQGETFVFDAERYKEAVVTPWYRNQDQP
QFFLVAEICWNLTPDSSFPSATHQSFRDYYSTKYGVTLTQRDQPLLDVDHTSARLNLLTP
RYVNRKGVALPVSSERTRRAKRDRLDQKQILIPELCRVHPFAAPLWFATVALPCVLYRIN
ALLIADEIRRAVAIDVGLGIPKINDHTMPGFQWPALDFGWSLAEVLSADSEKNDKKKDED
ESKKDIKDSESSSDKEKTEADGSQKSTEEDTGLEDDTPPVEKTINDILQEKEAAEADAAF
EIGTWSNDMASSIPETSEYDELMEPLPPNLTFCTSASGGTNWCDPVVKPKYNQYGASKNF
SMADSDDSFMSSDLDSDDTDLDYDGSDEDADANGFCSSRNANTTMGVRIEYKTAHEAEAF
DIERTKKVNPAPLPDEEDDANDRAIHDELIRQGSAPDEYIQKFRSAVTQHKQDIIDKNQL
ITKEDDITEILPETKETYHSSIICKKTETQAIDELFPYTTDELEIKDGQISIESIERNKR
VLLAQIKEKIPSYQLKKLNCFSMKDINIDSKDYINEKIVNVGFDNKEGYKDVCKGMGEFI
PYYTDGRGGKEFDFDFQPVLEGHPGPSPSVILQALTMSNANDGINLERLETIGDSFLKFA
ITAYLYCAHPTVHEGKLSHMRSKQVSNLNLYRLGRNKRLGARMIASKFEPHDNWLPPCHK
PPPTLHPRLNGEGKDVMQHLETPLDAAGCFIPYNLITQHSIPDKSIADCVEALIGAYLLE
CGPRGALLFMSWLGIRVLPCHHVELDDNHPFVKRVKKMEKDNQEPKSPSTPDLKRSSSTS
SCSDDDSPPQQEVFPAEDWSWPARAVGSLQPYRDADGKWMQPIFGELRAPPSPLLRYIED
PEGELEQMLSGYDALERTLQYRFKDRSLLLQALTHASHHSNRLTDCYQRLEFLGDAILDY
LITRHLYEDPRRHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLTKYVK
IQEENGHSISEEHYLIQEDAMEQAEDVEVPKALGDLFESVAGAIFLDSGMSLGAVWKSYV
NLMGAELEAFSAAAPKSPVRELLEAEPDTAKFGKPERLADGRRVRVCVEVFGRGTFKGVG
RNYRIAKGTAARCALRHLKVHRAR
NT seq
7815 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggacgcctgctgttcccgcttcacggcggcggagggcggcgcccgactagcc
gccgcagcctccacaaagaacatcctagccgtggagtatgctagcttcatacctgtccga
ctactctatgaaaaagcccaccagatccgcgggtctctttttgaaggcagtaagcgatca
atatacataactcgagcttccagagtacaagtggtagcgtttgaactgaagatactgacc
gacctcggcacggtagcagcccagacgtacgatgaggtgtatgattggatggctgagttg
gagactaaagaggtcgtaatatgcacttcggcagtcctgaaacggatattacatgaggag
ttattgtctatgtctaatatcaacgtacttattgtagacagctgccatctcatctataaa
gatgaagatttgaaatatattatgcgcacctacaaagaatgctcgaaaaatgatcaacca
ataatcctagcactaacatacccactgttcaattcgaaaaaagactccgaagacaagaaa
gagacagccgaacaaagcgagaaagagaaacaagacacaattactacaagcgagaaagag
acggcacaacaaagcgagaaagagaaacaagagataatttctacaagcgagaaagagacg
gcacaacaaagcgagaaagagaaacaagccacaattactacaagcgagaaagagacggca
caacaaagcgaggaagagaaacaagatgccattgagaaagagaatacagaagatttgacg
gctccgtcttcggaaggtgcgagtgagacgccaaataggatttttgaacgtgcgaaaggg
acggagattgaagagattggtgtttataagaacttggacgattttgatatgtatgagaag
ttggagtggaaaatagaagaattggagaaggaattgtgttgtcaaatggatttagctgaa
gatatagatggcgggaagagaatgtcagcctcagtaagcaagcctcgggagcttataatt
gagtatgatggcaaaccgacagaagaacagctgcccgatatatatagagacttagataag
tacatgagggataccgtgcaagatgctttggactttatcgaagatcatagacacgacccc
acggaaatatacggcgatgagttgtatgatgagttcatgagcattccagaccccaccata
gaccccaaaatggtgttcaagaagtttctatacgttttggagcaactaggaccctacgca
gccgacaaagcagcattctgtctcctaaacaaactagaaaaactaaaaattaaaattcct
tacgagagacatttcattctcatgtgtctatgtacgacagtttttataaaaattcgatgt
tacgccgaactagtatttaacaccatagaggatgaatggaccagaatcaaaacgttttcg
acaccgaaaatattacgattcgtcgaaattttggaaaaattcaaaccgcccgagtcaaag
aattcgacaaatgtcagatcggactgtgatagtgcatctatcaaacccgatgctgatctt
gacagcaaagatgactcagataatacgaaaaagaaagaagacaatataaaaaaactacta
aaagatatagaatcgtgtgattttaacactttaggcgacaaaatacaagacaaagtccat
atatacgaaactaatctgaaagaattgcccaattctaaatcggatagcgacgaaaaatcc
gattcgacgccggaaagtccgaaaaaccaaccgaatgatataccaaacgaattttccgaa
ccaaaatctgacaataatgatcaattaaaaagtcagccggatggtcaacagaatagtcag
ccgtccgttcaagatagtcagccagcaactaaaattggaatggatcataaagggaatgaa
tttctttttcaacaacgaggtttattagggtttaccagaagagctgggaataggctgcgg
ggtaaatctaggatgcaaaggaataatgcagccagagccctgcagatgcaacagaaccct
gatgctttgtgcggcattgtttttatgaaggagccgcttattgccaagatcatgttcatg
gtgattgtggacatgtcccgctgcaacccgtgtctgagttacgtgtgtgtgcagttctgt
gccaccgagtccccggccgacccgggaaccgaacccagggagtgtttgaggcagggaaag
cgacaggaggatgtgctgaagaaattccgtatgcacgaatgtaacctactgctagcgacg
tcagcactagaggagggcattgacctcccgcggtgtaacctcgtactgaggtgggatgta
ccaccttcgtaccgttcgtacggcctgtgccgcgggcgcggccgcgcggcgcgctcggcg
gccgccctcctgtgcagcgactccaccgacactactgcactgttgctacaccatgtcgcg
acctacagggaactcgatcagatcatcagccgtaaatgtggctgcggaattcaggacgaa
ccaccccaatccgaagaagatcatgcagacgcattcaccacatttgttaaaccatattct
cccaacgacaataaaaatacaaatcaaaaaaatacagaaacagtcagtgacacagtggcc
atcgatgacacagacgccaacgacactctgtcaacgaatgacacagaaccaatatccgcg
aatgacgcttttcaaataaatgacgcgatgtcaatcgacatgaatgacgctcagccaatg
aatgacgcggtcgacagtatatgtcgaaatgatgttaatatacataatttggatattaac
aatgatttagtagaattgaatgataaaatagctaatgatttgaaaattgatgataataaa
aatcaaatcgatggagttttaccaaacaaagaaggtttagataaagatgtgatatctcaa
aacaatgagactggtgaaatagaactgaatccttctacaaaagatgaaaaaatactcgaa
aatgacgttaaaagtgatatatcaaataaaatagcgcacaaagatatagatgtgtcgtcc
aaagataaagatatgtcgtcaaaagatatgtcatgcaaaggatattgtaataagtgtttt
aatgcgaagttaaatggtgtttgtttgtgtacgaatgtgaatttatattatcagttgttg
gccaaatctaataatagcaaccgcggtgaacatagaaagggtcaaaatgaagaatccttt
gctagcgtcgatttgagtacggctatcgctttgatcaatcggtactgcggcaagctccca
tcggatactttcacccggctggctcctcagtggtggactgaggaagtggaattgccggtc
aaaggaaccgggcaggtcaggccggcctatatatgtactctacggctaccactcaactgt
cccgtcaaatataatattgtgggtcacccaatgccgacgaaggtgttagctcgccgaatg
gtcgcgctacaagcgtgtcggatactacacaagtctggcgagctggacaatcaactaatg
cccataggtaaagagaacttcagagcggtggaattggaaggtgtgaacaatatcggtacc
tacacgggtaatgaacccgccgacgcccacgactccgcccgccccggcactactaaacga
aggcagtattattataaacggacagcttgggcgtttactgactgtcaaccggtaatagac
tccacggacgaacaaatctacccgggtgtcgaccctgataccctggacatacacagcgat
gtagaggctaccagccaggaggagaagaaggaggggactagacataaggagggcaggagg
gatgccggtaaacgcaacatgctgtatgcgatagtatcaaagttatggtgcgccctaccc
gaacggtataatactcgaggcaggcgactccacgcgccgcaactagctagccaggctatt
gggatactcatggccaggcaggagccagacaatctccagatcccgtcgttcccggtgtac
acgcggtcgggcgaggtgcgagtgtccgtggagcacgtggccggggccgacgtcaggatg
tcgccgcgacgagctaaactcattcgaaggtttatgcgatttgtattcgcggaagtattg
cgcgtacgtcggcgcggtatgaaactacagagcgaaggttctacccacaacaactactac
atcgtgcctacagttaaaacggtgtctccagacggtctacacaagatagacatagactgg
gacttcctagaactcatataccaacatacggaagagaagaaagcgagtgacttagagaaa
ccagtactgtggcaggagatgcctgaagaggagaagtctgagaaggattctaacagacgc
agaagaggcaagaagcgaatggcgaatcccctcttgaaacaaggcgaaacgtttgtattt
gacgcggaaagatacaaggaggctgtagtcacgccctggtataggaaccaggatcaacct
cagttcttcctagtagcagaaatatgctggaatctaactccagactcctcgttcccatcg
gccacccaccagagcttcagagactactacagcacgaagtatggagtcactctcacgcag
agggaccaaccactgctcgacgtggaccatacttctgctagacttaatctacttacacct
agatacgtaaaccgcaaaggcgtagcccttcccgtgtcatcagagcgcacccggcgagct
aaacgagatcgcttggatcagaaacagattctaataccggagctatgtcgcgtgcatcca
ttcgccgcgccgctctggttcgctactgtagcattgccctgtgtcttgtataggataaat
gccctcctgatagcagacgagatacgtcgcgcggttgcgatagacgtaggtctaggtata
ccgaagatcaatgatcacaccatgcctggcttccagtggccagcgctggacttcgggtgg
agtttggctgaggttttgagcgcagattcagaaaagaacgacaaaaagaaggacgaggat
gaatctaagaaagacataaaggacagtgagagcagcagtgacaaagaaaagacagaagca
gacggctcacagaagagtacagaagaagacacaggtctagaagatgacacaccccctgta
gagaagactatcaatgatatactgcaggagaaggaagctgctgaggctgacgctgctttt
gagataggtacttggagcaacgacatggcgtcctcgatccccgagacgtcggagtacgac
gaactgatggaacctcttcctcccaacctcaccttctgtacttctgcttctggaggtaca
aattggtgcgatcctgtagtcaagccgaaatacaaccaatatggagcgtcaaagaacttc
tcaatggctgacagcgatgattcttttatgtctagcgatctagattcagatgatacagac
ctagactacgacggtagcgatgaagatgcagacgccaatggattctgcagcagtaggaat
gctaacacgacaatgggcgttcgcattgagtataagactgctcatgaagctgaagcattc
gacatagaacgaactaagaaggtgaatcctgcgccgttgcctgatgaggaagacgacgcc
aacgacagggcaatacatgatgaactcatccgtcaggggagcgcgcctgacgagtacata
caaaagttccgttcagccgtcacccaacacaaacaagatatcatagataagaaccaacta
ataaccaaagaggatgatatcacagaaatcctaccagagacaaaggaaacgtaccatagc
tccataatctgtaaaaaaactgaaacacaagccatagacgaattattcccgtacaccaca
gacgaattggaaatcaaggacggacaaataagcatagaaagtatagagagaaacaaacga
gtgttgctagctcaaataaaagaaaaaataccaagctaccaattgaagaaattaaattgc
ttttccatgaaagatattaatattgattcgaaagattatattaatgaaaagattgttaac
gttggttttgataataaagaggggtataaagatgtttgtaaggggatgggggagttcata
ccgtattatacggatggaagggggggcaaggaattcgattttgatttccaacccgtgctg
gaagggcatcctggaccgagtcctagtgttattttgcaggcgcttacaatgtcaaatgcg
aacgacggtataaatctagaacgactagagacgattggcgacagtttcttaaagtttgct
ataaccgcatacttgtactgcgcgcaccctaccgtgcatgaggggaaactcagtcatatg
aggagtaaacaggtatcaaatctgaacctctaccgactaggccgtaacaagcgactgggc
gcgcgtatgattgcgtccaaattcgaaccacacgacaactggctacctccctgccataag
ccacctcctactttacatccgaggttgaatggcgaaggtaaagacgtgatgcagcatctg
gaaactccattggacgctgcggggtgtttcatcccgtacaacttgattacccagcacagc
ataccagataaatcaatagcggattgcgtggaagccctgataggggcgtatttactggag
tgcggtccccgtggggccctactgtttatgtcgtggctggggatcagggtgttgccgtgt
caccacgtcgagttggacgataatcacccgtttgtgaaacgagtgaagaagatggagaaa
gataatcaggaacccaaatccccctcaacaccggacctcaagcgcagttcctctacatcg
tcatgttcggacgacgacagtcccccccagcaggaagtgttccccgcggaggactggtcg
tggccggccagggcggtcggctcgctgcaaccttacagagatgcggacggcaagtggatg
cagccaatatttggcgagttgagggcgccaccgtcgcctttgctccggtatatagaagat
cctgaaggggagttggaacaaatgctctcaggttacgacgccctcgaaaggaccctccag
taccggtttaaagaccgctctctgttactgcaagcgttgacccacgcctctcatcatagc
aaccgtctgactgattgctatcaaagattggagtttctaggagacgccatattagattac
ctaataacccgtcacctatacgaggacccgcggcgtcactcgccgggcgcgctgaccgac
ctccgctccgcactagtcaacaacactatattcgctactttagcggctcgacatgggttt
cataaatattttcgccacatgtcgcccggactgaacgaggtgttaactaaatacgtgaag
atacaggaggagaatggacattccattagtgaagagcattacttaatccaagaggacgcg
atggaacaagctgaagacgtagaggtccccaaagcgttgggtgacctcttcgagtccgtg
gctggtgctattttcttggattcaggtatgtccctgggcgctgtatggaagtcgtacgtg
aacctgatgggagctgagttggaggcgttcagtgcggccgcgccgaagtctcccgtaagg
gaactacttgaagctgaacctgatacggctaagtttggcaaaccagaacgcctagcagac
gggcgtcgcgtccgcgtgtgtgtcgaagttttcggccgcggcaccttcaagggggtcggc
agaaactataggatagctaaaggaacagctgcgcgatgcgccttaagacatttgaaggtt
catagagctcgctag
DBGET
integrated database retrieval system
