Spodoptera litura (tobacco cutworm): 111361789
Help
Entry
111361789 CDS
T08157
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu04382
Cornified envelope formation
sliu04512
ECM-receptor interaction
sliu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111361789
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111361789
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
111361789
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sliu04147
]
111361789
00536 Glycosaminoglycan binding proteins [BR:
sliu00536
]
111361789
Exosome [BR:
sliu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111361789
Glycosaminoglycan binding proteins [BR:
sliu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111361789
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
111361789
NCBI-ProteinID:
XP_022833957
UniProt:
A0A9J7ESB5
LinkDB
All DBs
Position
Unknown
AA seq
1862 aa
AA seq
DB search
MRALAGCPGPQAPRPAPAPPRGGGDQTAARALLYPLVSRHKRRARTGFWRSALRAMAVSV
LWLLAALAPLLSVNAQYDGYGDWNNAVPNEWPTDVRREENVYPSERVTHGLYNREDIPPL
PPPSSRGLNFAYYDPETKQRVAPIDRNCTAPGCCVRKCLAEKGSRGFPGVAGPPGSQGFP
GHDGPEGPQGPKGQKGQMGNPGPRGPKGDRGKPGERGFVGRIGPSGPQGEPGLPGIPGRD
GCNGTDGEPGERGPQGMQGPRGFPGPKGEKGDKGVPAYTGRNQKGQKGEPGADGMQGRPG
PIGPSGPGGVPGSKGATGPMGPPGPKGDKGSKGTKGAAIQGDKGDRGDPGDRGPSCPPVT
LPWHPDDKGAIKGIQGDMGPKGDKGEPGPMGDKGDTGIMGEAGRPGQMGIKGEKGIIGNP
GERGRDGPYGNPGPRGQKGDRGNDGLPGLDGRPGSKGEPGKDGLQGPRGLKGIPGPAGGR
TGSRGPPGPPGPRGYQGRPGPRGTDGLSGEKGDMGPMGPPGGQGEPGAPGLEGRAGPKGE
KGEPGPLGKQGDVGPRGYDGPQGPTGLRGPKGEDGISIPGRKGESGLNGIPGAKGQKGEK
GYLGLRGLPGNSTLGTAGSPGEVGPPGEKGEKGSPGFDGIPGSPGSKGDIGGRCNDCRPG
GPGQKGDRGLDGYLGAVGDPGQPGPPGLTGERGADGLNGMPGEAGAPGERGDDGPIGPPG
ERGADAQIASNLLKGQPGPQGERGPPGPPGPKGEKGMLGFKGNQGPIGMPGQKGDHGLMG
PPGNDGTPGSDGNPGIPGKDGISIRGEKGGPGSTGQKGDKGFPGRMGIKGEPGQCPANLE
ALTRGDPGATGAPGPQGMPGERGEKGDKGYAGRPGLKGEMGFPGKQGPVGPRGIPGERGD
KGDVGPIGFPGSPGETGPRGYPGNPGFKGDKGELGLSMPGPPGPSGFPGAKGDKGNRGVP
GTPGADGLPGATGLTGEKGDQGIMGRPGYAGPPGQKGEPGPLGPPGIAGKPGAPGIDGAK
GEQGYPGPEGKPGVIGLPGPKGEPGLQGMPGQKGFPGSRGRPGRNGIQGIPGAPGEKGEK
GERGFTGPTGLPGLDGPMGPAGRDGAKGDRGFDGRPGSPGKSGPTGEKGDRGFPGLVGEK
GSPGLASEKGDKGDSGVPGLRGLDGIPGVPGAKGDRGESGRPGYGLPGVRGEKGDIGAPG
LDGLPGAPGERGDRGFSGIKGDKGLMGIPGEPGQPGLPGMDGPPGIKGDVGLPGFNGIKG
DKGNPGAPGRDGFDGKPGPRGLTGPVGPIGAPGLTGEKGDQGLPGVSINEKGEKGEIGPP
GLVGLTGEKGDMGDRGLPGLQGEKGDRGYIGQKGDKGRIGLTGEKGDRGPAGPTGIPGVT
IVGEKGLPGIPGKHGRPGPPGAIGEKGEQGLPGLPGQVGPAGLPGTVGPQGQKGDRGREG
VAGPPGFDGTPGFQGAPGPQGEKGDRGEKGATGIGYEGQKGDQGFPGETGMVGEKGDKGD
RGFDGRDGQPGPMGPSGEKGERGFPGVFGVAGSQGEKGDKGEAAGFIFGPKGEPGPPGLP
GADGIPGNDGLPCPPGIDGLPGMKGDRGYQGRPGPPGPVGPPGLQGLQGERGEIGLTGQV
GLPGPPGAPCVETDYLTGILVVRHSQGSNVYDCPEGLIKLWDGYSLLYIDGNEKAHSQDL
GHAGSCVRKFSTMPFLFCDLNEVCNYASRNDRSYWLSTNEETPMNPVQGNDIIKYISRCV
VCEAPANVIAVHSQSHSIPECPSGWAELWIGYSFVMHTGAGGQGGGQALESPGSCLESFR
TVPFIECNGEGGTCHKFANKLSFWLTTINDSEQFAMPRRETLKSGNLLQRVARCAVCMKN
TK
NT seq
5589 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgccctcgcgggctgtccggggccgcaggcgccgcgcccggcacccgcgcctccg
cggggcgggggtgatcagactgctgcccgagcactcctctatcctttagtatcccggcac
aaacggcgcgcgcgcacgggattctggcgcagcgcgctccgggctatggcggtgtccgtg
ctatggttgttagctgcgttagcaccgcttctaagtgtaaatgcgcaatacgatgggtat
ggagattggaataatgctgtaccaaatgaatggccgaccgatgttagaagagaagaaaac
gtttacccgtccgaacgtgtaacacatggattgtacaaccgggaagatatcccgccgctt
ccgccgccgagcagtagaggtctcaacttcgcctactacgatcctgaaaccaaacaacgg
gttgcacctatcgaccgaaactgtacagcacctggatgctgtgtgcgaaaatgcctggcc
gaaaaaggaagcaggggatttccgggtgtagctggacctccgggaagtcaaggatttcct
ggtcatgatggacctgaaggaccacaaggtcctaagggacaaaagggtcaaatgggaaat
ccaggacctcgaggaccaaaaggagatagaggaaaaccaggtgaaagaggtttcgttggc
agaataggtccttctggtcctcaaggtgaaccaggtttgcctggtataccgggtagagat
ggttgtaacgggaccgatggagaacctggagaacgtggaccacaaggtatgcaaggacct
cgaggtttccctggtcctaaaggagaaaaaggtgacaaaggagtaccagcctacacagga
cgaaaccaaaaagggcaaaaaggagaaccaggtgctgatggaatgcaaggaagacccggt
cctataggaccatcgggtcctggtggcgtaccagggtctaaaggtgccactggccctatg
ggtccacctggtcctaaaggagacaaaggttcaaaaggtactaaaggtgcggcaatccag
ggtgacaaaggagaccgaggtgacccaggtgacagaggtccgagctgtccgcctgtaaca
ttgccctggcacccggacgataagggtgctataaaaggaatccaaggtgatatggggcct
aaaggcgataaaggagaacctggtccaatgggcgacaaaggtgatactggaattatgggt
gaggcaggacgtcctggacagatgggtattaaaggagaaaaaggaataatcggcaacccc
ggtgaacgaggccgagacggaccatatggcaatccaggaccaagaggacaaaagggagat
agaggtaacgatggattgccaggtctagatggaaggcctggaagtaaaggagaacctgga
aaagatggattacaaggaccaagaggtttaaaaggtattcctggtccggctggcggtcgt
actggatcacgtggaccaccaggtccaccaggtcctaggggctatcaaggtagacctgga
cctaggggaactgatgggttatctggagaaaaaggtgatatgggaccaatgggacctcca
ggaggacaaggtgaacctggtgcaccaggtcttgaaggaagagctggacccaaaggtgaa
aaaggtgaacctggaccattaggaaaacaaggcgatgttggtccacgaggttatgatgga
cctcaaggtccaacgggcttaagaggtcccaaaggagaagatggtatttctataccaggt
cgaaaaggagagagtggattaaatggtatacctggtgctaaaggtcaaaaaggtgaaaaa
ggttaccttggattacgtggtcttcctggtaactctactttaggtactgctggtagtcca
ggagaagttgggccaccaggagaaaagggtgagaaaggaagtccaggttttgatggcata
cctggtagtccaggatctaaaggtgacataggcggacgatgcaatgactgtaggcctgga
ggacctggacagaaaggagatcgcggtctagatggatatctgggtgcagttggagatcca
gggcaaccaggccctccaggacttacaggcgagagaggagctgacggtcttaatggtatg
ccaggagaagcaggagctccgggtgaacgaggtgacgatggacccattggaccacctggt
gaaagaggagccgatgcacaaattgcatcaaatctcttgaaaggacagcctggaccacaa
ggtgaaaggggacctcctggtcctcctggaccaaagggagaaaaaggaatgttagggttc
aaaggaaatcaaggtccaattggtatgccgggacagaaaggagatcatggactgatgggt
cctccaggaaatgatggaactccagggtctgacggaaacccaggtatacctggtaaagat
ggaatttcaatcaggggagaaaaaggtggaccaggtagtacagggcaaaaaggagataaa
ggattcccaggtagaatgggtattaaaggagaacctggtcagtgcccagcgaatttggaa
gctctgactagaggtgacccaggcgcaacaggagcgcctggtcctcaaggaatgccaggt
gaaagaggagaaaagggtgataaaggttatgcaggacgtcctggacttaaaggtgaaatg
ggcttccctggaaagcaaggtccagtgggtcctcggggaataccaggagaaagaggagat
aaaggagatgtgggacctataggtttccctggatcccctggagaaacgggacccagaggt
taccctggtaacccaggttttaaaggtgataaaggtgaacttggtctatccatgcccgga
ccacctggtccttctggttttcctggtgcaaagggtgacaaaggtaacagaggagtacct
ggtacgccaggcgctgacggtcttcctggtgctacggggctaactggagaaaaaggtgat
caaggtattatgggacgacctggttatgctggtcccccaggacaaaagggagagccaggt
ccactagggccacccggaatagctggaaaacccggtgctcctggaatagatggggctaaa
ggagaacagggctatccaggaccagaaggaaaacctggagtaatagggttaccaggacct
aaaggcgaaccaggactgcaaggaatgccaggccaaaaaggattccctggtagccgtggt
cgtccaggccgaaatggtattcaaggtattcctggggcacctggagaaaaaggtgaaaag
ggagaacgtggttttactggaccaacaggtctgcctggtctcgatggacctatgggcccc
gctggccgcgatggcgctaaaggtgatagaggttttgatggacggcctggttcaccaggt
aaatctggaccaaccggtgaaaagggagatagaggatttccaggattagttggagaaaaa
ggttcacctggattagcatctgaaaagggtgataagggtgatagcggtgttccaggtctt
cgaggtttggatggtataccaggtgtaccaggagcaaaaggtgacagaggtgaatcaggt
aggccaggttatggacttccgggtgtaaggggagaaaagggtgatataggcgcacctgga
ttagatggactaccaggtgcaccaggagaaagaggagatcgaggctttagtggaattaag
ggagataagggattgatgggtattccaggtgaaccaggtcaacctggattacctgggatg
gatggtcctcctggtataaaaggagacgtaggtctacctggttttaatggaatcaaaggc
gataaaggcaatcctggtgcaccgggaagagatggatttgatgggaaaccaggtccacga
ggtctaacaggtcctgtaggacccataggtgcccctggtttaactggagaaaaaggagac
cagggtcttcctggtgtatcaatcaatgaaaaaggagaaaagggagaaattggtccgcca
ggattagtaggtttgactggagaaaaaggagacatgggcgatagaggattgccaggatta
caaggtgaaaaaggagatcgaggttacataggccagaaaggagataagggaagaatcggt
cttacgggagagaaaggtgatcgcggtcctgctgggccaactggtataccaggagtgaca
atagttggcgaaaaaggattaccaggtattcctggaaaacatggccgaccagggccacct
ggcgcaattggagagaagggagagcaaggtcttcctggtcttcctggacaagttggacca
gctggactaccgggtacagtaggaccacaaggacaaaaaggagatcgtggtcgagaaggt
gtggcaggtccaccaggctttgatggaactccaggattccaaggtgctcctggtccacaa
ggagaaaagggtgatagaggcgagaaaggtgctacaggaatcggttatgaaggacagaaa
ggagatcaaggttttccaggtgagacgggtatggtaggagaaaagggtgataaaggtgac
cgcggctttgatggacgagatggacaaccaggccctatgggtccttcgggagagaaaggt
gaaagaggattccctggagtatttggtgtagctggaagtcaaggcgagaaaggtgataaa
ggtgaagccgctggctttatatttggacctaaaggcgagcctggacctcctggattacct
ggtgcggatggaataccgggtaatgatggtttaccttgtcctccaggcatagatggatta
ccaggtatgaaaggagatcgtggataccaaggacgacctggtccgcctggtcctgtcggt
ccaccaggtttgcaaggcttacaaggtgaaagaggtgagatcggtttaactggacaagtg
ggacttcctggaccgcctggagctccttgtgtagagactgactatctaactggaatcctt
gtagtacgacacagtcaaggaagtaatgtatatgattgtccagagggattgataaaacta
tgggatggatattccttactctatatagacggcaacgaaaaagcgcatagtcaagacttg
ggacatgctggctcatgtgtaagaaaattcagtacaatgcccttccttttctgtgacctg
aacgaagtatgcaactatgccagtcgaaatgatcgaagttattggctttcaactaatgaa
gaaactcctatgaatccagtgcaaggaaatgatataataaagtatatttcaaggtgtgtc
gtctgtgaagcaccagctaatgtcattgctgttcacagtcaatcgcacagtatccctgag
tgtccatcagggtgggctgaactatggatcggatacagttttgttatgcacacgggtgcg
ggaggccaaggaggaggtcaggctttggagagtccgggatcatgtttggaaagcttccga
actgtaccgttcatagaatgcaacggagaaggcggtacatgccacaagtttgccaataaa
cttagtttttggttaactaccatcaacgactcagaacagtttgccatgccgagacgagaa
acattaaagtcaggaaatctactccagcgtgtagctcgttgtgcagtttgcatgaaaaac
accaaatag
DBGET
integrated database retrieval system