Spodoptera litura (tobacco cutworm): 111361790
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Entry
111361790 CDS
T08157
Name
(RefSeq) collagen alpha-1(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu04512
ECM-receptor interaction
sliu04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111361790
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
111361790
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sliu04147
]
111361790
00536 Glycosaminoglycan binding proteins [BR:
sliu00536
]
111361790
Exosome [BR:
sliu04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111361790
Glycosaminoglycan binding proteins [BR:
sliu00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111361790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
111361790
NCBI-ProteinID:
XP_022833958
UniProt:
A0A9J7EM64
LinkDB
All DBs
Position
Unknown
AA seq
1801 aa
AA seq
DB search
MSGPARARFIALHLVPATLLLLSWTPTPSSAVVCNQTECDCTGIKGDRGDIGPPGIPGGQ
GEYGDDGPMGRPGRPGEAGDIGDRGDYGDKGTHGIDGPYGPRGDTGPQGPYGLEGVIGLS
GLDGCSGIDGILGPPGPMGYPGDRGVPGPIGEKGSQGMAGEGGANSRGSKGDMGELGRAG
TPGPIGIRGYQGDSGNPGETGDEGPMGIRGEAGDRGNDGEDTLGPMGEKGDQGPIGEAGK
PGTIIRVGQVRQNITVLTKGNKGERGLPGQRGVKGIKGMPGSRGRTGPYGLDGPQGYKGE
QGQEGPRGKIGHQGRVGSAGPKGDKGAPGYAGQDGADGWKGERGEDGMPGNPGLQGPSGE
PGIYDERLDVPPTQGPQGPQGPEGILGPPGAPGFDGQRGLPGILGPPGFPGIKGTQGRPG
VTGTSMKGEPGNAGFKGFPGFPGPSGFPGAPGVTGPKGFKGAKVIGPDGEDGVPGLDGIP
GLRGDRGDQGDQGPQGYPGTGVHGVGPPGEEGPPGSPGIVGDPGTPGRPGFHGPKGERGD
DCPFCKSGLDGPKGKRGDDGTSGRKGYPGPEGPSGRKGYKGFPGQDGLPGPKGPKGNKGI
AGGAGPQGPKGPKGRIILPPEDLIRADPGPIGDRGFIGAPGNPGDAGWPGYRGDSGLKGI
KGQMGEDGFPGRPGRNGTRGRDGEPGRQGRPATTPIQFLTGQKGEAGIKGETGEPGEDGI
KGEVGESLDHGINAKGPKGFTGMPGIKGIRGLKGERGDMGYDGMPGVHGEQGPAGRSIQG
LKGFKGFVGRKGDIGPYGLSGNQGSAGPKGEMGNKGKKGNRGDAGLAILAGEKGFDGLAG
ERGDDGDAGYPGMQGRYGITGNKGQQGLPGDAGPTGPPGPQGRKGIQGIEIRGVPGLNGQ
PGYPGRKGLFGEPGLQGSHGINGKMGNKGVKGNTGPTGVRGMYGEQGAMGFSGFPGISGN
VGVQGSQGERGDTGSIGGSGTPGKMGPEGPWGRKGETGEDGAPGLDGFDGNPGFKGGRGD
WGLPGQKGASGDNSAKGLKGNEGSPGYNGLDGRPGFPGAKGERGDAGTSGLNIAGPPGLK
GDKGNTGYPGAYGIRGRKGEIGDFGFKGIIGDEGDKGFPGMPGRPGRRGNVGLKGQQGYQ
GPFGLLGEKGDQGIEGRPGRMGLDGVPGEVGYIGPAGPPGIPGAKGDRGDIGRTIYVPPT
NGDVGDMGMDGLPGQKGLKGNTGPYGLVGIKGERGEDGEQGQTGEFGMTGFKGISGDQGP
PGLPGIRAENAPRGEQGKPGFDGLPGWPGHRGQKGKPGEYGINGPDGVPGPPGVVFEGPK
GMVGMDGAPGPRGISGRPGIPGGIGNIGARGIKGDAGEIGDSYSPKGARGDQGHKGFKGV
RGQKGDLGEGGIPGRPGFIGERGFKGLRGDQGEEGPFGPPGIKGVKGDAGDLLAASEIIP
GPRGDMGPRGYDGQPGRDGRPGEIGRNGIPGSKGVRGDIGYPGEIGSPGLMGPEGLKGVK
GLQGFEGYRGATGAAGPPARQPMPKSRGFYFAVHSQERMIPQCPSGTSPLWSGYSLIHII
ANGKAHGQDLGASGSCLRKFSTLPYMFCNFNEICNFAQREDYSFWLSTPEPMPMSMTPIQ
AKDVGNYISRCQVCEAPTRTIAIHSQSNLVPECPSGWSELWQGYSFLMHTAGADATGQSL
ISPGSCMRQFRARPFIECNGLGRCNYFATAISYWLSVIEDYRMFEKPEQQTLKADLVSKV
SRCAVCMRDWPVPRKSSVRVPTTIGDLSSVPNASYRRPRPSRQPYYRRPNWRRGVRGRRR
Q
NT seq
5406 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcccggcgcgtgcgcgtttcatcgcgctacatctcgtgcccgccacacttcta
ctcctttcatggactcctactccttcatcagcagtggtgtgcaatcagacggaatgcgac
tgtactggtatcaaaggagatcgcggtgatataggaccaccaggaatccctggtggtcaa
ggtgaatatggtgacgatggacccatgggtcgtccaggccggccgggagaagcaggagac
atcggcgacagaggcgattacggagacaaaggaacacacggtatcgatggaccgtatggg
ccaagaggagacactggaccgcaaggtccgtatggattggaaggcgttattggactgtca
ggtttagatggttgtagcggtattgatggcatcttgggaccacctgggcccatgggttac
cctggtgacagaggtgtaccgggaccaattggagagaaaggttctcaaggaatggctggt
gaaggaggggctaattcacgaggatctaaaggagacatgggtgaactgggtcgagcagga
actccagggcctattggaataaggggttatcaaggtgacagtggcaatccgggagaaact
ggtgacgagggaccaatgggtattcgtggagaagcaggggatagaggtaacgatggtgag
gacaccttaggaccaatgggagaaaaaggtgatcaaggtcccatcggtgaagctggtaaa
cccggaacaatcatcagagtaggtcaagttcgtcaaaatattacagtcctaacaaagggc
aataaaggtgaaagaggattaccaggtcaaagaggagttaaaggaatcaagggaatgcct
ggatcccgaggtcgaacagggccctacggtcttgacgggccacaaggatataaaggtgaa
caaggtcaagaaggtcctagaggaaagattggtcaccaaggtcgcgtaggtagtgcaggt
cccaaaggtgacaaaggtgcaccaggatatgcaggacaagacggtgccgatggatggaaa
ggagaaagaggtgaagacggaatgccaggcaaccctggcctacaaggtccttctggagaa
ccaggaatttacgatgaacggttggatgtaccaccaacacaaggacctcaaggaccccaa
ggccctgaaggtattcttggtcctcctggagctccaggctttgatgggcaacgcggatta
ccgggtattttgggacctcctggatttcctggaatcaaaggaactcaaggcaggccaggg
gttacgggcacatctatgaaaggagaaccgggaaatgctggatttaagggatttcctgga
ttccctggaccctcaggtttcccaggtgcacccggagttactggacctaaaggttttaaa
ggtgcaaaagtaattggtcctgatggcgaagatggagtaccaggtttggatggaatacct
ggcctaagaggagatcgtggtgatcagggtgaccaaggaccacaaggatatccaggaact
ggtgttcatggtgttggaccaccaggtgaagaaggtcctcctggatccccgggtatcgtt
ggtgatccaggtacgcctggtcgccctgggttccacggaccaaaaggagaacgtggtgat
gattgtccgttttgcaaatcaggcttggatggaccaaagggaaaaagaggtgatgacggc
acatctggtcgtaaaggctatccaggacctgaaggcccatctgggcgtaaaggatataaa
ggttttcctggacaagacggcctaccaggaccaaagggaccaaaaggaaacaagggtatt
gccggtggagccggacctcaaggaccgaaaggaccgaaaggacgcattatattacctcca
gaagatctaatcagggcagatccaggccccattggtgaccgaggtttcatcggtgcacca
ggaaatccaggtgacgcaggatggccagggtacagaggagactcaggtttaaagggcata
aagggtcaaatgggtgaagatggattcccaggcagacctggtagaaatggtacaagagga
cgcgacggagagccaggacggcaaggtcggccagccacaaccccaatccaattccttacg
ggacaaaaaggagaggcaggaattaaaggggaaacaggtgaaccaggagaagatggtatt
aaaggagaagttggtgaatcacttgatcatggaataaatgctaagggcccgaaaggtttt
accggaatgcctggtattaaaggtatcagaggattgaaaggagaaaggggtgacatggga
tatgatggtatgcctggtgtacatggtgaacaaggtccagctggtagatccattcagggt
ttgaagggttttaaaggtttcgtcggaagaaaaggtgatattgggccttacggattatcc
ggtaaccaaggttctgctgggcctaaaggcgaaatgggaaataagggaaagaagggaaat
cgaggtgacgccggattagccattttagctggtgaaaaaggttttgatggactggctgga
gaaagaggagatgatggtgacgcaggctatccgggtatgcaaggaagatatggaattaca
ggaaataaaggacagcaaggtttaccgggagatgctggccccacaggaccaccaggacct
cagggcagaaaaggaatacagggaatagaaatccgaggtgttcccggcttaaatggccaa
cctggctatcctggacgcaaagggttgtttggagaacctggtttacaaggtagtcatgga
ataaatggcaaaatgggtaataagggagtaaaaggaaatactggaccgacaggtgtccgt
ggtatgtatggagaacagggcgcaatgggtttcagtggattcccaggaatttctggaaat
gtcggagttcaaggaagtcaaggagaacgaggtgatactggttccataggaggttccgga
acacccggaaaaatgggaccggaaggaccatggggtcgtaaaggtgaaactggtgaagac
ggtgctccaggtttagatggttttgatggtaatcctggttttaaaggaggaagaggtgac
tggggtttgccaggtcagaaaggtgctagtggtgataattccgcaaaaggattgaaaggt
aacgaagggtcgcctggttacaacggtcttgatggaaggccagggttccctggagcaaaa
ggagaaagaggtgacgctggaacttcaggtctaaatattgcgggtccaccaggtttaaaa
ggtgataaaggaaatactggatacccaggtgcttatggaataagaggcagaaaaggtgaa
ataggagattttggttttaaaggtataattggggatgagggcgataaaggttttccggga
atgcctggtcgtccagggcgtcgtggaaatgttggactcaaaggacaacaagggtatcaa
ggaccttttggacttcttggagaaaaaggtgatcaaggtatagaaggcagacctggacgt
atgggtttggatggagttcctggagaagtaggatatataggcccagctggaccacctggt
atacctggagctaaaggagaccgaggtgatattggaagaacaatatacgtgcctcctact
aacggcgatgtgggtgatatgggaatggatggtctaccaggtcaaaaaggacttaaaggt
aacacaggcccatacggattagtcggtattaagggtgaacgtggggaagacggtgaacaa
gggcaaaccggtgagtttggtatgactggattcaagggtatatcaggtgaccaaggacct
ccaggtctccctggaatacgcgctgaaaacgccccacgaggtgaacaaggaaaacctggt
tttgatggtcttccggggtggccaggtcacagaggtcagaaaggtaaaccaggtgaatat
ggtattaacggccccgacggtgtacctggtcctcctggtgttgtattcgaaggaccaaaa
ggtatggtaggaatggatggagcaccaggcccgcgaggtatttctggacgaccaggaatt
ccaggaggaatcggaaacatcggagctcgtggtattaagggtgacgctggagaaattggt
gactcatacagtcctaagggagcgcgtggagaccaaggtcacaaaggttttaagggtgtc
cgaggtcaaaaaggagacttaggtgagggtggtatacccggacggccaggatttataggt
gagcgagggttcaagggtctaaggggtgaccaaggagaagaagggccatttggacctcct
ggaattaaaggagtgaaaggtgatgcaggagatttattagctgcttctgaaatcattcct
ggaccgcgaggagacatgggcccccgtgggtatgatgggcagcctggtcgcgacggaaga
ccaggagaaattgggcggaacggtattccaggaagcaaaggagttaggggtgacataggc
tatcctggtgaaattggatctcctggattaatgggacctgaaggtttaaaaggcgtaaaa
ggattacaaggttttgaagggtaccgtggagctacgggtgctgctggacctccagctaga
caaccgatgcctaaatcaagaggattttattttgctgttcattcacaagaaagaatgatt
cctcagtgcccatctggtacatcacccctttggagtggatattctcttatccacattata
gccaacggaaaagcacatggacaagatttaggtgcctcgggaagttgtttgcgcaaattt
tcgaccctaccttacatgttctgtaactttaatgaaatttgcaatttcgctcaacgtgaa
gattatagtttctggttatcaactcctgaacctatgcctatgtctatgacacccatacag
gccaaggacgttggaaattacatatcgagatgccaggtatgcgaagctcccacacgaact
attgccattcatagtcaaagcaatttggtgcctgagtgtcctagtggttggagtgagttg
tggcaaggatacagtttcctaatgcacactgccggtgcagatgcaacaggacaaagtctt
atatctcctggatcatgcatgagacaattccgcgcgcgacccttcatcgaatgtaatggc
ctagggcgctgcaattactttgcaacagcaatctcgtactggctctcggtcatagaagac
tacagaatgtttgaaaaaccagaacagcaaacattgaaagctgacctagtctctaaagtc
agcagatgcgctgtttgtatgagagattggcctgtgcctcgcaagagctccgttcgcgtg
cctacaacaataggagatttgagctccgtacctaatgcatcctaccgccgaccgcgccca
tcacgccagccttactaccgcagaccaaactggcgtcgtggtgtgcgtggaagacgccga
caatga
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