Spodoptera litura (tobacco cutworm): 111361896
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Entry
111361896 CDS
T08157
Name
(RefSeq) putative ATP-dependent RNA helicase me31b
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111361896
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sliu03019
]
111361896
03036 Chromosome and associated proteins [BR:
sliu03036
]
111361896
Enzymes [BR:
sliu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111361896
Messenger RNA biogenesis [BR:
sliu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
111361896
mRNA degradation factors
5'-3' decay
Decapping complex
111361896
Chromosome and associated proteins [BR:
sliu03036
]
Eukaryotic type
Gene silencing
piRNA pathway
111361896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
111361896
NCBI-ProteinID:
XP_022834106
UniProt:
A0A9J7ENE1
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MMTENRISSSNHVGNSMTSQNKGDVDKSIDDIGWKSKLKIPPKDRRIKTSDVTDTRGNEF
EEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV
DPKKDAIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGGTNLRDDIMRIYQNVQVI
IATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLFSAT
FPLSVKQFMEKHLREPYEINLMEELTLKGVTQYYAFVQERQKVHCLNTLFSKLQINQSII
FCNSTQRVELLAKKITELGYCCYYIHARMAQAHRNRVFHDFRAGLCRNLVCSDLFTRGID
VQAVNVVINFDFPRMAETYLHRIGRSGRFGHLGIAINLITYEDRFALHRIEQELGTEIKP
IPKVIDPALYVARPDDDDSADK
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgatgaccgaaaatagaattagttcaagtaatcacgttggaaacagtatgaccagtcag
aataagggtgatgtcgataaaagtatcgatgacatcggttggaaatcaaaattaaaaata
cccccgaaagacaggagaataaagactagtgatgtaacagacacaagaggtaatgagttt
gaagagttttgcctaaaacgtgagctgctgatgggcatttttgagaaaggatgggaaaaa
ccttctcctattcaagaggcttctattcctattgcactcagtggtaaagatgtcctcgca
agagctaaaaatggaactggcaaaactggcgcttattgtattccagttttagaacaggtg
gatcccaaaaaagatgctattcaagctttaattgtggtaccaactagggagttagcactc
cagacatcacaaatttgcattgaactggcaaagcacacagatattcgcgtaatggttact
actggaggtactaatctccgggatgacattatgcgtatttatcaaaatgttcaagttatt
attgctacgccgggtcgtatgattgatctcatggataaacaagttgccaagatggaccag
tgcaggatgctggttcttgatgaggcagataaacttctttcccaagactttaaaggaatg
ttggatatggttatttcacgattgcccaaagaacgccagatcttactgttctccgcaacc
ttcccactgagtgtaaagcaattcatggaaaagcacttacgagaaccatatgagattaat
ctcatggaggagttaacactgaagggagttacacagtactatgcatttgtacaagagaga
cagaaagttcattgtttaaatacacttttttctaagttgcaaataaaccagtctataata
ttctgtaattcaactcagcgtgtagagttactggcaaagaaaataactgaactaggatac
tgctgttactacattcacgcgcgtatggcgcaagcacatcgtaatcgtgtgttccacgat
ttccgggcgggactctgccgcaatctcgtgtgctctgacctgttcactagaggtatcgac
gtgcaagctgtcaacgtcgtcatcaactttgatttcccacgtatggctgaaacttatcta
catcgcatcggtcgttcaggacgtttcggccacttgggtattgctatcaacctaatcaca
tatgaggaccgttttgctctgcatcgcattgagcaagagctgggtactgagatcaagccg
atcccgaaggtgatcgacccggcgctatacgtagcgcgcccggacgacgatgactcggcc
gacaagtaa
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