Spodoptera litura (tobacco cutworm): 111362259
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Entry
111362259 CDS
T08157
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03020
RNA polymerase
sliu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
111362259
09124 Replication and repair
03420 Nucleotide excision repair
111362259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sliu03021
]
111362259
03400 DNA repair and recombination proteins [BR:
sliu03400
]
111362259
Enzymes [BR:
sliu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
111362259
Transcription machinery [BR:
sliu03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
111362259
DNA repair and recombination proteins [BR:
sliu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
111362259
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
111362259
NCBI-ProteinID:
XP_022834655
UniProt:
A0A9J7ETV0
LinkDB
All DBs
Position
Unknown
AA seq
1176 aa
AA seq
DB search
MYETEDDQYEEIDVEEISSELWQEACWIVINAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DSPPIELQAEAQHSSGEIETPPKYLLKFDQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTIVKEHEDPIETQHQKTFIGKIPIMLRSTYCLLNNLTDRDLSELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFSMKDGKFAYKTEIRSCLEHSSRPTSTLWVNMM
ARGGQNIKKSAIGQRIIAIVPYIKQEIPIMIVFRALGFVADRDILEHIIYDFDDPEMMEM
VKPSLDEAFVIQEQNVALNFIGARGARPGVTKEKRIKYAREILQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFKNLLKEVRMYAQ
KFIDRGKDFNLELAIKTKIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGAAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIADATKIFVNGCWVGIHRDPEQLMATLRKLRRQMDIIVSE
VSMIRDIRDREIRIYTDAGRICRPLLIVENGALLLKKKHIDDLKERDFNNYGWQNLVASG
VVEYIDTLEEETVMIAMSPDDLAQVKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSI
VAILCYTGYNQEDSVILNASAVERGFFRSVFYRSYKDSESKRIGDQEEQFEKPTRQTCQG
MRNALYDKLDDDGIIAPGIRVSGDDVVIGKTITLPENDDELEGTTKRYTKRDASTFLRNS
ETGIVDQVMLTLNSEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCE
GITPDIIINPHAIPSRMTIGHLIECIQGKVSSNKGEIGDATPFNDAVNVQKISSLLQEYG
YHLRGNEVMYNGHTGRKINAQVFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYRIHVCNFCGLIAIANLRNNTFECKG
CKNKTQISQIRLPYAAKLLFQELMSMNIAPRLMVVN
NT seq
3531 nt
NT seq
+upstream
nt +downstream
nt
atgtacgaaacagaagatgatcagtatgaagaaattgacgtggaggaaatatcatcggag
ctttggcaagaagcttgttggatcgtcatcaacgcttattttgatgaaaaaggtttggta
cgccaacaattagacagttttgatgaattcattcaaatgtcagtccagcgtatcgtagaa
gattcaccacctatagaattacaagctgaagctcagcattcatcgggtgaaattgaaact
ccaccaaaatatcttctaaaattcgatcaaatctacttatcaaagcctacacactgggaa
aaagacggtgctccctcacctatgatgcctaatgaagctcggctgcgaaacttgacttat
tctgctccactgtatgtggatataaccaaaacaattgtaaaggaacatgaagaccctatt
gaaacccagcatcaaaaaacatttattggcaaaattccgattatgcttcggtctacctat
tgtcttctgaataacttaacagacagagacttgtctgaattaaatgaatgtccacttgac
cctggtggttactttattatcaatggttctgaaaaagtactaattgcccaggaaaagatg
gcaacaaatactgtatatgtattcagtatgaaagatggtaaatttgcttataaaacagag
atccgatcatgcctagagcacagttccaggcccacttctactttatgggttaacatgatg
gctcgtggtggccaaaatataaaaaaatctgcaattggacaaagaataattgcgattgtt
ccatatatcaaacaagaaattcctataatgattgtattcagagctctcggttttgttgct
gatagagatatattggagcacattatctatgactttgatgaccctgaaatgatggaaatg
gtcaaaccttccttagatgaagcttttgtaattcaggaacaaaatgtggctcttaatttc
attggtgcccgtggtgctcgcccaggtgttactaaagaaaagcgtatcaaatatgcaaga
gaaattctacaaaaagaaatgttacctcatgttggggtgtcagatttctgtgaaactaaa
aaagcttattttctgggctatatggtacatcgtttgttgcttgctgcattaggacgtcgt
gagctagatgacagagatcattatggcaacaagcgtttagatttagccgggcctttactt
gcatttttgtttagaggtctatttaaaaatctgttaaaagaagtaagaatgtatgcccag
aaattcatcgacagaggaaaggactttaatttggaattggctattaaaacaaaaattata
actgatgggttaagatattcccttgctactggaaattggggcgaccaaaagaaggcccat
caagctagagctggagtatcacaagtattgaataggttaacctttgcttcgacattatca
catttgcgacgtgtgaactctccaattggtcgagatggtaagctagccaaacctcgtcaa
ttacataacactttatggggtatgatatgtcctgccgaaacacctgaaggtgctgctgta
ggtttagtgaaaaatctagccttaatggcttatatttcggtaggcagtcagccatctccc
attcttgagttcttggaagagtggtctatggaaaatttggaggaaattgcaccttcagct
atagctgatgccacaaaaatatttgtaaatggttgttgggttggtattcacagagaccca
gagcaattaatggctactttaagaaaactaagacgtcaaatggatattattgtttctgaa
gtgagcatgattcgtgacattagagacagagaaataagaatttacacagacgccggcaga
atatgtcgccctttgttaattgtcgaaaatggagctttgctattaaagaagaaacacatt
gatgatcttaaggaacgtgattttaataactatgggtggcaaaatttagtagcgagtggt
gttgttgaatacatagacaccttggaggaagagactgtaatgatcgcaatgagccctgat
gatttagctcaagtaaaggaatatgcatactgtactacatatactcactgtgaaattcat
cctgctatgatactgggtgtgtgtgcgtcaatcataccattccctgatcacaaccagagc
cctaggaatacctaccaaagtgctatgggtaagcaagctatgggtgtttacattactaac
ttccatgtaagaatggacactctggctcatgtgttatattacccacacaagccattggtt
actacaagatccatggaatatctgcggtttagagaattgcctgcaggcattaattcgatc
gtagcaattttgtgctatacaggctacaatcaagaagatagtgttattctgaacgcatcg
gctgtagaaagaggattcttccggtccgtattttacagatcttataaggattcggaatct
aaaaggattggtgaccaagaggaacagtttgaaaaacctactcgacaaacatgtcaaggc
atgagaaacgctttgtacgacaaattagatgatgatggcattattgcgccgggtataaga
gtatctggtgatgacgtagttattgggaaaacaatcacactacctgaaaatgatgatgaa
ttagaaggtacaacaaaacgttacacaaaacgtgatgcatcaacatttctccgtaatagt
gaaactggtattgtcgaccaggtgatgttgacgctaaatagcgaaggttacaaattctgc
aaaattcgtgtcagatcagtgcgtattcctcaaatcggggacaagtttgcttcccgccat
ggtcaaaaaggaacttgtggaattcagtacaggcaagaagatatgccatttacttgcgag
ggtataactcctgatattattattaatccacacgctatcccatctcgtatgacaattggc
catttaattgaatgcatccagggcaaagtatcttctaacaaaggagaaattggtgatgca
acaccattcaatgatgctgtaaatgtgcagaaaatatcttcgctactgcaagagtatggc
tatcatctgcgtggtaatgaagttatgtataacggacatacaggacgaaagataaatgcc
caagtatttttgggtcccacatattatcaacgtctgaaacacatggtggatgacaaaatc
cattcaagagctcgaggacctgtgcagattttagttaggcaacctatggagggcagagct
agagatggtggattacgtttcggagaaatggaacgggattgtcaaattgctcatggcgcc
gcacaattcctacgtgaacgtctttttgaagtgtctgatccttatcgtatacacgtttgc
aacttctgtggtcttattgcgattgcaaacttgagaaataatacttttgaatgtaaagga
tgtaagaataagacccaaatatcgcaaataagactgccatatgctgcgaagttattgttc
caagaactgatgtctatgaatattgcgccaagattgatggttgtaaattaa
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integrated database retrieval system
