Spodoptera litura (tobacco cutworm): 111363126
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Entry
111363126 CDS
T08157
Name
(RefSeq) uncharacterized protein LOC111363126
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
111363126
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sliu03021
]
111363126
03019 Messenger RNA biogenesis [BR:
sliu03019
]
111363126
Transcription machinery [BR:
sliu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
111363126
Messenger RNA biogenesis [BR:
sliu03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
111363126
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pcf11_C
zf_PCFS4
Pfc11_Clp1_ID
Motif
Other DBs
NCBI-GeneID:
111363126
NCBI-ProteinID:
XP_022835691
UniProt:
A0A9J7EQR2
LinkDB
All DBs
Position
Unknown
AA seq
1149 aa
AA seq
DB search
MATPTLAHAAADQRRGPPVSKSIAPVRAWQRRDPRLARLQQPASTVPATPSPPVADVTPT
NPRCDASRTHLSEQQKRRSKDLLRAESECNHTNTKPETERNQMPAYVNKLPDPKTISKML
RIPKITRPETRQDGEAVPAKRKRDNVWTELPPAAKKRTSTSELVAAKELGNYHKERQPTF
SREDCNLREDNEQSFFECQKSISNIMSQAKEHLTDGQLDKNQYNKLMNQILQLNDKLELK
EAKQKNNKVPSPKLSPNERNRFADMCMRYDAEALDLKTNGLLPIPPMMPMLDPYQQQKPW
EGPRPRASDEFGPRRFRGPMPPYFRAGKFDKRAVRPPFDPRMAMPPLPTPKIGMCQGECP
LTPYERSESPPPLGAPGFAIPPTDFKVIEYIDQDPFKTIQIDGIPREIRFYGNTAVIMLD
WDDPREIKFLPGCRRVTFDNKHSVVLTFSEGYKQVEFDNQVFDIKFGAPTRELYINGRWY
ECFFGGQPFGVIIDSRPKFVYVEGPMPQVDIGKAKRTDLVAGKINLTVNATQVHPVYLDA
KVQKILVNGQYLTVRFVDSLRTVLINEQPFKAEFGGLPKPIVVGSEKYFIRFSALPRNIK
PGHVQIANMEGIGLPLLPPVKKVGELKKENPIEVDQQEQPIARPVKTPTSEPDLDMLASL
MPSSTVPAPGSEYSVAEHLFSKTDKISGLETPMKEKPAPVLPILGNINVNDLFAKLVATG
IVQVPTTTQPEPQEEVKNKPEEVENRPREEKNYIHKVDLMNPETLRVKQPGLVAKLYDGM
QCSGCAIRFPLVHTLRYSQHLDWHFRQNRRHRDAARRAHSRPWHYDRSDWMKYEEVEDLE
EREKSWFETGGKPAASAEDTAEAPSAPAPAFTSHCCALCGDMFQQFFNDDEEEWHLRNAI
KHKDDYYHPLCFEDYKTPLTKAGEPKAKESSKDVASEEKMEEEAIEIKDVDETAEQSDNE
SVVEVVEDPKELDPVDIDDEDDVVFLPEPVVEVVVEDDAETDDELTAERAERDRLAQIDF
SKIKVKQEPIDLDDEPMVTAEEETIPTRIDHTNPTVESSIDGNFQLDAVSIPAASIPIGG
IRINISKSFVTKNQEEKILEDVSAGSEPLPPGEEPELEYTLKPALQGVQFSIQPPVNQGN
ELSGLCSIM
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atggccacgcctactcttgcgcatgcggccgccgatcagcggcgcggaccgccggtatct
aagagtatcgcccctgttagagcctggcagcggcgcgacccgcgactggcgcgtctacag
caacccgccagtactgtacccgccacgccctcaccgcctgtcgccgacgtgacaccaacc
aacccacgctgcgacgcgagccgtactcatctgagtgagcaacagaaacggaggtctaaa
gatctacttcgagcagagtcagaatgcaaccataccaatactaaacctgaaacggagcgt
aatcagatgcctgcttatgtcaataagttgcctgacccaaagacaattagcaaaatgtta
cggattcctaaaataacccggccagaaaccaggcaagacggcgaagctgtgcccgctaaa
cgtaagcgggacaatgtgtggacagagctgccacctgctgcgaagaagcgcacgtccacg
tcggagttggtggcggccaaggaattgggcaactatcataaagaaagacaacctactttc
tcaagggaagattgtaaccttcgagaagataatgagcaaagcttctttgaatgccaaaaa
tctatttcaaatataatgtctcaagcaaaggaacaccttacagatgggcaattggacaag
aaccaatacaacaaattaatgaaccaaattcttcaacttaatgataaactcgagctgaag
gaggccaaacagaaaaacaacaaagttccaagcccgaaattgtcgcctaatgaacgaaac
agatttgctgacatgtgtatgcgatacgatgctgaagctcttgatttgaaaacaaatggt
ttgcttcccatcccgcccatgatgccaatgttggacccttatcaacaacaaaagccttgg
gaaggaccaagaccacgagcaagtgacgaattcggacctagacgattccgaggtccaatg
ccaccatatttccgagccggcaagtttgataagagggctgttagaccgcctttcgatcct
cgtatggcgatgcctcctctacctacacccaaaattggtatgtgtcaaggagagtgtccg
ctaacaccttacgaacgaagcgaatctccacctccattgggagctccaggcttcgcaatc
ccaccgacagattttaaagtcattgaatatatagatcaggaccccttcaaaaccatccaa
attgatggtatacctcgggaaatcaggttttacggtaacaccgccgtaattatgctggat
tgggatgatccaagggaaatcaagttccttcctggatgcagacgagtaacgttcgacaat
aaacactcagtagtactaacattcagtgaaggctacaagcaagtggagtttgataatcaa
gtattcgatattaaatttggtgcaccgacacgagaactgtatataaacggtaggtggtac
gaatgtttcttcggtggacagccatttggcgtaattattgacagtagaccaaaatttgtt
tatgtagaagggcctatgcctcaagtggacataggtaaagctaaacgcaccgacttggta
gccggtaagatcaacctcactgtgaacgctacacaggtgcatccagtgtacttggacgca
aaggtacaaaagattttggtcaacggacagtatctgaccgtgcgcttcgtagattcattg
cgcacagttttaatcaatgaacagccttttaaagcagagtttggaggccttcccaagccc
atcgttgttggcagtgagaaatattttataaggttctccgctctgccgagaaatataaag
cctggacatgttcagattgctaatatggaaggtataggcttgccactgctgccacccgtc
aaaaaagttggtgaacttaaaaaagaaaacccaatagaagttgaccaacaagaacaaccc
attgcgcgtccggtgaagacgcccacctctgaacctgacctcgacatgttggcgagcctc
atgccgtccagtactgtgcccgcccccggctcggagtacagcgtggccgagcatctattc
tccaaaacagacaagatctctggacttgagacacccatgaaagagaaaccagctccagta
ctgccaatattaggcaacattaatgtcaacgaccttttcgctaagcttgtggcgactggt
attgtgcaagtgccgaccactacccagccagagcctcaagaggaagtgaaaaataaacct
gaagaagttgagaatagaccaagggaagaaaagaattacattcataaagtagacttgatg
aatcccgagacattaagagttaaacaaccaggactggtggctaagttgtacgatgggatg
cagtgttcagggtgtgcgattcggttcccactcgtgcacacgttgcgatactcgcaacac
ttggactggcacttccgacagaatcgacgccatagggacgcggcgcgtcgcgcgcactca
cgaccctggcactacgaccgctccgactggatgaagtatgaggaggtcgaggacttggag
gagagagaaaagagttggttcgagacggggggtaagcccgcggcatcagccgaggatacg
gcggaggcgccgtcggccccggcgccggcgttcacctcacactgctgcgcgctctgcgga
gatatgttccaacaattcttcaacgacgacgaggaggaatggcacctcaggaatgctatc
aaacacaaagatgattactatcatccactctgcttcgaagactacaaaacgccactaaca
aaggcaggagaacctaaagcaaaggagtcctctaaggacgtcgcatctgaggaaaagatg
gaagaggaagcaattgagatcaaagatgtggatgagactgcagagcagtctgacaatgag
tctgtagttgaggtcgtcgaggacccgaaggagttggaccccgttgacatcgatgacgag
gatgacgtcgtttttctaccagagccagtggtcgaggttgtcgttgaagatgacgctgaa
acggatgacgagcttactgctgaaagagctgaacgagaccgtctcgcacagattgatttc
agtaagatcaaggtcaagcaggaacccatcgatctcgatgacgaacctatggtaactgct
gaagaagaaaccatcccaacgcgaatagaccacacaaatccaacagtggagtcatctatc
gacggcaactttcaactggatgcagtaagcattcccgcagcctctatacccattggagga
atccgaatcaacatctccaaatcctttgtgactaagaaccaagaagaaaaaatactggag
gacgtgagtgctggtagtgagcccttgccaccaggtgaggagcctgaactagagtacaca
ttgaaacctgcacttcagggtgtccagttcagcatacaacctccagtcaaccaaggtaat
gagctctctgggttgtgctcaatcatgtaa
DBGET
integrated database retrieval system
