Spodoptera litura (tobacco cutworm): 111363136
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Entry
111363136 CDS
T08157
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111363136
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sliu03041
]
111363136
Enzymes [BR:
sliu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111363136
Spliceosome [BR:
sliu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
111363136
Complex C
U4/U6.U5 tri-SnRNP related factors
111363136
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
Flavi_DEAD
AAA_30
T2SSE
Cas3-like_C_2
SRP54
Motif
Other DBs
NCBI-GeneID:
111363136
NCBI-ProteinID:
XP_022835701
UniProt:
A0A9J7EUG0
LinkDB
All DBs
Position
Unknown
AA seq
884 aa
AA seq
DB search
MDKLNKRRYSSSSDSAEEHRLKDIKERDEFAKRLKKRDEERVKKVAESSSKRSYEEAAKR
LKLEAEDREKILPKLRIHSRRKYLEKRKDDKVIELEADIADDEYLFDESSLTQRERLERE
HKKTILKLAKEHEKARELENVQRYHMPQDLGKDAKGEYVEVDEREKVPHSEQQKWEQEQI
KSAFFKFGAKDAKAQDEYELLLDEQIDFIQALQLEGNKEKKETEEKSEYQKIRMTIEETK
KSLPVYPFRDSLIEAIKTYQILIVEGETGSGKTTQIPQYLHEAGFTKDGKKIGCTQPRRV
AAMSVSARVAQEMNVKLGNEVGYSIRFEDCTSDRTVIKYMTDGTLHREFLSEPDLASYSV
MIIDEAHERTLHTDILFGLVKDITRFRPDLKLLISSATLDAEKFSNFFDDAPIFRIPGRR
FPVDIYYTKAPEADYVDACVVSVLQIHATQPLGDILVFLTGQEEIETCFEMLQERTKKIG
KKLRELIILPVYANLPSDMQAKIFEPTPEGARKVVLATNIAETSLTIDNIIYVIDPGFAK
QNNFNSKTGMESLMVVPISKASANQRAGRAGRVAPGKCFRLYTAWAYKYELEDNTIPEIQ
RINLGNAVLTLKALGINDLIHFDFLDPPPHETLVLALEQLYALGALNHHGELTKAGRRMA
EFPTDPMLAKMLLASEKYKCSEEIVSIAAMLSVNSSVFYRPKDKIIHADTARKNFFHPHG
DHLTLMNVYNQWLGSEYSVQWCYENFIQYRSMKRARDVREQLAGLMERVEIDMVSSISDD
TNIRKAITAGYFYHIAKFSKGGHYKTVKHNQTVMIHPNSALFEELPRWVIYHELVFTSKE
FMRQVTEIESKWLLEVAPHYYKAKELEDSTNKKMPKTVGKSSNT
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggataaattaaataagagacgttattcgtcaagttcagatagtgctgaagaacatcgt
ttaaaagatattaaggaacgtgatgagtttgcaaagaggctaaaaaaacgtgatgaagaa
agagtaaagaaagttgcagagtcttccagcaagagatcatatgaagaagcagctaagcgc
ctcaagttagaagctgaagatagggaaaagatattgcccaagttacgtattcactctcgt
cgaaagtacttggagaagaggaaagatgataaggtgattgagttggaagcagacatagct
gatgatgaatatctatttgacgaaagcagcctaactcaacgggaaagattggaaagagaa
cacaaaaaaacaatattaaaattagctaaagagcatgaaaaggccagggagttggagaat
gtccagaggtatcacatgccacaagatttgggaaaagatgcgaaaggtgaatatgttgaa
gttgatgaaagagaaaaagtgccacattcagaacaacaaaagtgggaacaagaacaaatt
aaatcagccttctttaaatttggggcgaaagatgctaaagcacaggatgagtatgagtta
ttactggatgaacagattgactttatccaagctcttcaattggaaggtaataaagaaaag
aaagaaactgaagaaaaatcagaatatcaaaaaataaggatgactattgaggaaaccaag
aaatctctgccagtttacccattcagggattcattaattgaggccattaaaacttaccaa
atactaatagtagaaggtgagacaggatctggcaaaactacacaaatacctcagtacctt
catgaagcaggttttacaaaagatggcaaaaaaattggatgtactcaaccaagaagagta
gcagctatgtcagtatcagcccgagtggctcaggaaatgaatgtcaaactgggaaatgaa
gttggctacagcatcagatttgaagactgcacatctgacagaactgtcatcaaatatatg
actgatggtactctacatagggagttcctttctgaaccagacttagcctcttacagtgta
atgatcattgatgaagctcatgaacggacattgcacactgatattttatttggacttgtg
aaagatatcactaggtttagaccagatttaaaattacttatatcaagtgctaccttggat
gctgaaaaattctcaaacttctttgatgatgctcctatcttcagaatacctggaagaaga
tttccagtagacatctattacacaaaagctccagaagctgattatgtggatgcctgtgtt
gtgtctgtgttacagatacatgccacacagccactgggagacattttagttttcttgaca
ggtcaagaagaaattgaaacttgttttgaaatgttacaagaaagaacaaaaaaaattggc
aaaaagttaagagaacttattatactaccagtctatgccaacttaccaagtgatatgcaa
gctaaaatatttgaacctactccagaaggtgctcgtaaagtagtattagctactaatata
gcagaaacttctttgactattgacaatattatttatgttattgaccctggatttgccaaa
cagaataattttaactcaaaaactggtatggaaagtctaatggtggtacctatttctaaa
gcctctgcaaaccagagagcaggtagagctggcagagtagcaccaggaaaatgcttccgc
ttatacacagcatgggcatacaaatatgaacttgaagacaatacaattccagaaatacaa
agaataaatcttggtaatgcagttctcacacttaaagctttaggaattaatgatctgatc
cattttgatttcttagatccgccaccacatgaaacactagtgttagccttagaacagctt
tatgcattaggagctctcaatcatcatggtgaattaacaaaagctggtaggagaatggct
gaatttccaacagatcccatgctggctaaaatgttattggccagtgaaaaatacaaatgt
tcagaagaaatagtgtccattgctgccatgttgtcagtaaatagctcggtattctacaga
cccaaagacaagattatacatgcagatactgcacggaagaatttcttccatccacatgga
gatcatttaacactaatgaatgtgtataaccaatggcttggttctgaatattcggtgcaa
tggtgctatgagaattttattcagtacagatcaatgaagagagcacgggatgtgcgagaa
caactggcaggcctcatggaaagggttgaaattgatatggtgtcaagtattagtgacgac
actaatattcgcaaagcaattactgctggatatttctaccatatagcaaagttttcaaaa
ggtggtcattacaagacggtgaagcataaccaaactgtaatgattcaccccaacagtgca
ctgtttgaagaattacctcgatgggttatatatcatgaactagtatttacttcaaaagag
tttatgagacaggtaacagagatagaaagtaaatggcttctggaagttgctccccattat
tacaaagctaaagaactagaagactcaacaaataaaaagatgcctaaaactgttggtaaa
tcttcaaatacctaa
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