KEGG   Spodoptera litura (tobacco cutworm): 111364606
Entry
111364606         CDS       T08157                                 
Name
(RefSeq) exosome complex component RRP41
  KO
K11600  exosome complex component RRP41
Organism
sliu  Spodoptera litura (tobacco cutworm)
Pathway
sliu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:sliu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    111364606
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:sliu03019]
    111364606
Messenger RNA biogenesis [BR:sliu03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     111364606
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     111364606
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 111364606
NCBI-ProteinID: XP_022837293
UniProt: A0A9J7J2L9
LinkDB
Position
5:complement(6344542..6352357)
AA seq 259 aa
MSSDFNVKRPGLELLSSQGLRLDGRRPNELRRIQCKLGVFTQPDGSAYIEQGNTKVLAAV
YGPHQAAKSKSLQDSVVINCHYSMATFSTGERKKRPRGGRKSEAISMQLTQAITTAIKKE
LYPRSQIDVYLEVLQADGGAYSASVNAATLALIDAGIPMKAYLCSCTASIAWKDGKPEPL
VDVSHVEESAGGSVLTVSSLPSINSVAWVDMSQRLHADYLSVVMKRAMQGCRDIEVILDK
AVREHLGESWTMSDDAVAI
NT seq 780 nt   +upstreamnt  +downstreamnt
atgagttcagatttcaatgttaaaaggccaggcctagaactattatcaagtcaaggacta
cgtctcgacggccgtagacctaatgaacttcgtcgtattcaatgcaaacttggtgttttt
acacagcctgatggtagtgcgtatattgagcaaggaaatacaaaagttttagctgcagtt
tatggacctcatcaggctgcaaaatcaaaatctttacaagactctgtcgtcataaactgt
cattacagcatggcaacattctctacaggcgaaagaaagaagcgaccgcgtggaggtcgc
aagtcggaggcgatatctatgcagctaactcaggcgatcacaactgctatcaagaaagag
ctgtaccctcgctcgcagatcgacgtataccttgaagtattgcaggcagatggaggtgca
tactcagcgagtgtgaacgcagcgacgctcgcgttgatcgacgctggtataccaatgaag
gcttacctctgtagttgcacagcttccatagcgtggaaggacggcaagccagagcctttg
gttgatgtcagtcatgttgaggagtccgctggaggttctgtactgacagtgtccagtttg
cccagtataaatagtgtagcatgggtagacatgtctcagagactccacgcggattatttg
agtgtcgtcatgaagcgggccatgcagggatgtagagatattgaggtaattttggacaag
gcagtgagagagcatttaggcgaaagttggaccatgtcagatgatgcagttgcgatataa

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