Spodoptera litura (tobacco cutworm): 111364606
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Entry
111364606 CDS
T08157
Name
(RefSeq) exosome complex component RRP41
KO
K11600
exosome complex component RRP41
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111364606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sliu03019
]
111364606
Messenger RNA biogenesis [BR:
sliu03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
111364606
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
111364606
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
111364606
NCBI-ProteinID:
XP_022837293
UniProt:
A0A9J7J2L9
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Position
5:complement(6344542..6352357)
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AA seq
259 aa
AA seq
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MSSDFNVKRPGLELLSSQGLRLDGRRPNELRRIQCKLGVFTQPDGSAYIEQGNTKVLAAV
YGPHQAAKSKSLQDSVVINCHYSMATFSTGERKKRPRGGRKSEAISMQLTQAITTAIKKE
LYPRSQIDVYLEVLQADGGAYSASVNAATLALIDAGIPMKAYLCSCTASIAWKDGKPEPL
VDVSHVEESAGGSVLTVSSLPSINSVAWVDMSQRLHADYLSVVMKRAMQGCRDIEVILDK
AVREHLGESWTMSDDAVAI
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagatttcaatgttaaaaggccaggcctagaactattatcaagtcaaggacta
cgtctcgacggccgtagacctaatgaacttcgtcgtattcaatgcaaacttggtgttttt
acacagcctgatggtagtgcgtatattgagcaaggaaatacaaaagttttagctgcagtt
tatggacctcatcaggctgcaaaatcaaaatctttacaagactctgtcgtcataaactgt
cattacagcatggcaacattctctacaggcgaaagaaagaagcgaccgcgtggaggtcgc
aagtcggaggcgatatctatgcagctaactcaggcgatcacaactgctatcaagaaagag
ctgtaccctcgctcgcagatcgacgtataccttgaagtattgcaggcagatggaggtgca
tactcagcgagtgtgaacgcagcgacgctcgcgttgatcgacgctggtataccaatgaag
gcttacctctgtagttgcacagcttccatagcgtggaaggacggcaagccagagcctttg
gttgatgtcagtcatgttgaggagtccgctggaggttctgtactgacagtgtccagtttg
cccagtataaatagtgtagcatgggtagacatgtctcagagactccacgcggattatttg
agtgtcgtcatgaagcgggccatgcagggatgtagagatattgaggtaattttggacaag
gcagtgagagagcatttaggcgaaagttggaccatgtcagatgatgcagttgcgatataa
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