Spodoptera litura (tobacco cutworm): 111364999
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Entry
111364999 CDS
T08157
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
sliu
Spodoptera litura (tobacco cutworm)
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sliu03021
]
111364999
03036 Chromosome and associated proteins [BR:
sliu03036
]
111364999
Transcription machinery [BR:
sliu03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111364999
Chromosome and associated proteins [BR:
sliu03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
111364999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
HHH_3
SH2
Spt6_S1
HHH_9
Tex_N
S1_RRP5
Tex_central_region
OB_RRP5_4th
HTH_10
Motif
Other DBs
NCBI-GeneID:
111364999
NCBI-ProteinID:
XP_022837855
UniProt:
A0A9J7ESJ3
LinkDB
All DBs
Position
6:complement(3159952..3177231)
Genome browser
AA seq
1701 aa
AA seq
DB search
MADFLESEAEESEIDSEDEQPAKKPKRKAAVQSDDEDEDEEDDEERLREELKDLIDDAPI
EESGSDGEDSDASAGPKKRKKSDDELDDRLEDEDYDLIEENLGVKVARNKFKRLRRLDED
DDSDNEGNDDPELEREVIAEKLFVGGSDEEDENRSESAAPRGEADYDDDNEDLESDADDF
IVDDDGRPIAERKKKRKPIFTDASLQEGQDIFGVDFDYDEFEKYGEEDYEDEEDEDLDEY
LEDEEEEGEKRRTKKGKPKRPSKKSIFEIYEPSELKRSHFTDLDNEIRKTDVPERMQTRE
VPITPVEEGSTELEDEAEWIYKQAFLKPPVSKPDAQEARERTRRGNSTITKIRQALDFMR
NQTLEVPFIAFYRKEYVQPELSINDLWKVYKYDAKWCQLKQRKENLLKLFENMREYQLDK
VMENPDAPIPDNMRLIKDEDIERLKNVQTPEELRDVHTHFLLYYSTDLPEMQKVQRTKER
KKNLEEKKRLAREEADRNGEDPEEAAAAVEAAEPSEEEVTEVKYAVRSGPYELCRKAGIE
PLVKKFGLSPEQFAENVRDNYQRHEVEQQPVPPLEAAAEYTGSIVSAAEVVRRAVYMCGV
QLAREPLLRATLRDALRDRATLSVTPTARGLKDIDENHACYSLKYLKKKPVRDLTGDQFL
KLTIAAEDKLLELNISEQIEGNTSASYLEELKQLYQKDEFAATVEAWNELRAEAVTIALT
KIVMPELRRELQAVLLQESKEYVLKCCRRRLYDWLKVAPYESRVSDDDDEEWSDSNGLRV
LSIAYVPDRQHSAFACVVGAGGELADHLRLPHLLCRRNAWDARERQNKEADMTALRRFIL
RKKPHVIVIGGESREALNVKADVSECVQQLVEDEQFPRIPIEIADNHISKIYSNSIRGRN
DFREYPDILRQAICQARLLQDPLMEISQLCGPDEEILCLRYHSLQDQIAKEDLLEGIELE
FVNRVNEVGVDVNEAVLTGRGTELLQFVCGLGPRKAQALIKLFKQTNQKLENRTQLVTVC
HMGPKVFINCSGFIKIDTSSLGDSTEAYIEVLDGSRVHPETYEWARKMAVDALEYEDEDA
NPAGALEEILEAPERLKDLDLDAFAEELERQGFGNKSITLYDIREELNSRYKDLRVAYRS
LTPEELFDVLTKETPETFYVGKMVLASVVGITHRKPQREMLDQANPVRNDETGLWECPFC
HKNDFPELSEVWNHFDAGACPGQATGVRIRLDNGLSGYIHIKNLSDRHVSDPTERVRIGQ
TVHCRILKIDVERFSVDCSSKSSDLLDKNNEWRPPKDPYYDQENEDKDLRKEKEAKQTKE
RMQYVKRVIVHPAFHNISFAEAEKLMEKMGQGEVIVRPSSKGSDHLTVTWKVADGIYQHI
DVREEGKENAFSLGRSLWIQGSEFEDLDEIIARHVTPMAGHARDLIGYKYYKPLGGMRDK
AEEILKEEKARNPNKIHYVISAAKNYPGRFLLSYLPRARCTHEYVSVTPDGYKYRQRTFD
SLPGLLRWFKEHFRDPPPAATPAARTPATARTPHAGSVYHTPANHTPAFHTPAHTPGPAY
INTPYTPSAQTPYMTPFATTPRQPDFLPPPARVRPPPSGYTEPADWQKAAEDWMRRNNRE
ASSTPRASATPRASRTPRDVRDVRDVRESRSLGTPRTPRTPGGAGVSGRSSRAMSLRSTP
HTNTSPRSMSLGDATPLYDEN
NT seq
5106 nt
NT seq
+upstream
nt +downstream
nt
atggctgattttttggaatccgaagctgaggaaagcgagattgattctgaagatgagcag
ccagcgaagaagcctaagcgcaaggctgccgtgcaaagtgatgacgaagatgaggatgaa
gaagatgatgaggagcgtctccgggaagaacttaaagatttgatagatgatgctcctata
gaggagtcagggagtgatggagaggattcagacgctagtgcaggaccaaagaaaagaaag
aaaagtgatgacgaactggatgatagattggaggatgaggattatgacctcattgaggag
aatcttggagttaaggttgcaagaaataaattcaagcggttgcgacgcttggatgaggat
gatgacagtgacaacgaagggaatgatgatccagaacttgagagggaagtcatcgctgag
aaactctttgttggaggatcagatgaggaggatgaaaatcgttcagaatcagctgcacct
cgtggagaggcggactatgatgatgataatgaggatctggagtcagacgcggatgatttc
attgtcgatgatgacggtagacccatagcagaacgcaagaagaagaggaaacctattttc
actgatgcgtcattacaagaaggtcaggacatatttggtgtggactttgactacgacgag
tttgagaagtatggggaagaagattatgaagatgaagaggacgaggacctcgatgaatac
cttgaggatgaggaagaagaaggtgaaaagcgcagaacaaagaagggaaaacctaagcga
ccgagtaagaagtccatattcgagatctatgagcctagcgagttgaagagaagccacttc
actgatttggacaatgagattcgtaaaacggacgtgccggagcgcatgcaaactcgcgaa
gtgccgatcacacccgtcgaggaaggcagcactgagctagaagatgaggcggaatggata
tacaagcaagcgttcttgaagccgcctgtgtccaaacctgatgcacaggaggctagggag
agaactcggagaggtaacagcacaataaccaagatccgtcaagcactggacttcatgagg
aaccagacactggaggtgccgttcatagcgttctaccgcaaggaatatgttcagccagag
ctcagtatcaatgacctgtggaaagtctataaatatgatgccaagtggtgtcaactgaag
cagcgtaaggagaacctcctgaagttgtttgagaacatgcgagagtatcagctagacaag
gtgatggagaaccctgacgcacccataccagacaacatgaggctcatcaaagatgaggat
attgagagactgaagaacgtgcagacccccgaagagttgcgcgacgtccacactcacttc
ctgctgtactactccaccgacctgccggagatgcagaaggtgcagcgcactaaggagagg
aagaagaatttggaggagaagaagcgtctagctcgcgaggaagcagacaggaatggcgag
gaccccgaagaagcagctgccgcagtggaagctgcggagccgagcgaggaagaggtcacc
gaggtcaagtatgccgtgcgctccggaccttacgagttgtgcagaaaagcaggcattgag
cccctggtgaagaagtttggtctatcgccggagcagtttgcggagaacgtccgcgacaac
taccagcgacacgaggtcgaacaacaacccgtgccgccactagaagccgccgctgaatat
acggggtcgatcgtgtcggcggcggaggtggtccggcgcgccgtgtacatgtgcggcgtg
cagctggcgcgcgagccgctgctgcgcgccacgctgcgggacgcgctgcgggaccgcgcc
acgctctccgtcacgcccaccgccaggggactcaaggacatcgacgagaaccacgcctgc
tacagtttgaaatacctaaagaagaagccagtacgtgacctcacgggcgatcagttcttg
aaactgacaatagctgcggaagacaaactactggagctcaatatcagcgaacagattgaa
ggaaacacttctgctagctacctggaggaactcaaacaactgtatcagaaggacgaattc
gcagcaacagtagaggcatggaacgaattacgtgctgaagcggtgaccatcgcgctcacc
aagatagtgatgccggagcttaggagggaactacaggctgttctgctgcaggagtccaag
gaatatgttcttaaatgttgtcgtcgtcggctgtacgactggctgaaggtggcgccttat
gagtcgagagtgtctgatgacgatgatgaagagtggtcggattctaatggtctccgcgtg
ctgtcgatagcgtacgtcccggaccggcagcacagcgccttcgcgtgcgtcgtgggcgcc
ggcggggagctggccgaccatctgcgcctgccgcatctactctgccggcggaacgcctgg
gacgccagggagcgccagaacaaggaggccgacatgacggcactgcgcagattcattctg
cgcaagaaacctcacgtaattgtaatcggtggcgaatcacgagaagctctcaacgtgaag
gcggacgtgtcagagtgtgttcaacaacttgttgaagacgaacagttcccgcggatacct
atagagattgctgacaaccatatcagcaagatctacagcaacagtattaggggacggaac
gacttcagagagtaccccgacatcctccgccaagctatatgccaagcacgcctactacaa
gaccctctaatggagatatcacaactgtgcggaccagacgaggaaatattgtgtctccgg
taccattcactgcaggaccaaattgccaaggaagacctactcgaaggcatcgagcttgaa
ttcgtgaacagagtcaacgaagtaggtgtcgatgtcaacgaagcagtgcttactggccgg
gggaccgagctcctgcagtttgtatgcggcctcggaccaaggaaagcacaagcactaata
aagctcttcaaacaaaccaaccagaaactagaaaacagaacacaactcgtcacagtgtgc
cacatgggaccgaaagtcttcatcaactgctcagggttcatcaaaatcgatacgagcagt
ctcggcgatagcacagaggcctacatcgaagtcctcgacggatctcgagtacatccagag
acatatgaatgggctcgaaagatggcggtcgatgcgcttgagtacgaagacgaggacgcc
aacccagctggcgcattagaagaaattctagaagctcccgaaagactgaaagacttagat
ttggatgccttcgccgaagaattggagcggcaaggcttcggcaataagagtataacattg
tacgatatcagagaagaattgaactctaggtataaggaccttagggtcgcttatcgttcg
ctcacgcctgaagagttgttcgatgtgctaactaaagaaacgccggagactttctatgtt
ggcaagatggtgttggcgtccgtcgttggcatcacacataggaagccacagagggagatg
ttggaccaggctaaccccgtcaggaatgacgagacagggttgtgggagtgtcccttctgc
cacaagaacgacttccccgagttatctgaggtatggaaccacttcgacgcaggcgcatgt
ccaggtcaggcgacgggtgttcgaatccggctagacaacggtttatcaggctacattcac
atcaaaaatctatccgaccggcacgtgtccgatccgacagaacgtgtccgaatcggacag
actgtacattgtaggatattgaaaatagatgtagagagattctcagtagactgttcatcg
aaatcatcggacttgttggataaaaacaatgagtggagacctccaaaagatccgtactac
gatcaagaaaacgaagataaggaccttcgtaaggagaaagaagcgaaacagacgaaagaa
cgcatgcagtatgtgaagcgagtcatagtgcaccctgccttccataatatatcgttcgcc
gaggctgagaaactcatggagaagatgggacaaggcgaggtcatcgtcaggcccagtagt
aagggttctgatcacctcactgtcacatggaaagtggcagacggcatttaccaacacatt
gatgtgcgagaagaaggaaaggaaaatgcgttctctttaggtcgaagtttatggattcaa
ggttctgaatttgaagatctagacgaaataattgcgcgacacgtgactccaatggcaggg
cacgcgcgtgatctgatcggatacaaatactacaagcccctcgggggcatgagagataag
gccgaggaaatccttaaagaggagaaggcgcgcaacccgaacaaaattcactacgtgatc
tcagccgcaaagaactaccccggcaggttcctactgtcgtacttaccgcgcgcgcgctgc
acgcacgagtacgtgtccgtcactcccgacgggtacaagtacaggcagcgcaccttcgac
tccctgcccggccttctgcgctggttcaaggagcacttccgggacccgccccccgccgcc
acccccgccgcgcggacccccgccaccgcgcgcacgccccacgccggctccgtctaccac
acgccggccaaccacacgcctgccttccacaccccggcgcatacgccgggccccgcctac
atcaatacgccgtatacgccgtccgcgcagacgccttatatgacgccgttcgcgaccact
cctcgtcaacccgacttcctaccgcctccggctcgcgtgcgaccgccgccctctggctac
acggagcccgcggactggcagaaggctgccgaggactggatgcgacgcaataaccgagag
gcatcatccactccgcgcgcctccgctacgcctcgcgcgtcccgcacgccgcgggacgtg
cgggacgtgcgagacgtgcgcgagtcccggtcgctgggcacgccgcgcacgccgcgcacg
ccgggcggcgcgggcgtgtcggggcgctcgtcgcgcgccatgtcgctgcgctcgacgccg
cacaccaacacgtcgccgcgctccatgtcgctgggcgacgccacgccgctgtacgacgag
aactag
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