Spodoptera litura (tobacco cutworm): 111365054
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Entry
111365054 CDS
T08157
Name
(RefSeq) THO complex subunit 4
KO
K12881
THO complex subunit 4
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03013
Nucleocytoplasmic transport
sliu03015
mRNA surveillance pathway
sliu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111365054
09122 Translation
03013 Nucleocytoplasmic transport
111365054
03015 mRNA surveillance pathway
111365054
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sliu03019
]
111365054
03041 Spliceosome [BR:
sliu03041
]
111365054
Messenger RNA biogenesis [BR:
sliu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
111365054
TREX complex
111365054
Spliceosome [BR:
sliu03041
]
Complex C
Other components
EJC/TREX
111365054
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
111365054
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
FoP_duplication
Btz
Motif
Other DBs
NCBI-GeneID:
111365054
NCBI-ProteinID:
XP_022837996
UniProt:
A0A9J7EYG5
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Position
6:complement(3413017..3415523)
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AA seq
264 aa
AA seq
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MVDQIEMALDDIIKANKKAPRGGGAGRKFSTARKPAGGRGGAGGGFRNGRTGGVLRGRNR
GGISKSTNYSRGDVNSAWKHDMFNDFGERKIQRNTMPSITTGPTKLLVSNLDFGVSDSDI
QELFSEFGILKSAAVHYDRSGRSLGTADVVFERKADALKAMKQYNGVPLDGRAMNIQLAT
SEISNFRNEERNRISGGGGNTGGNGPVRRNMNRGGPNRNQGGGGSRGNARRPGRGGAGAG
RGKRPVPTAEQLDAELDAYVKEIK
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atggttgatcaaattgaaatggctttagatgacatcataaaagctaacaaaaaggcaccc
aggggcggcggcgctggacgtaaattcagtacggcaagaaaacctgctggtggtcgtggt
ggagctggaggtggatttagaaatggccgcacggggggcgttttgcgcggtagaaaccgt
ggcggtatatctaaatcaacaaattactcaaggggcgatgttaacagcgcatggaaacat
gacatgttcaatgactttggtgaacggaagattcaaagaaacaccatgccatcaatcaca
actggccccacaaaattattagtatccaacttagactttggagtctccgattctgacata
caagagctgttctcagaatttggaattctgaaaagtgcagctgtacattatgatagatct
ggaaggtctttaggtactgctgatgttgtgttcgagaggaaagctgatgcattaaaggca
atgaagcaatataatggtgtgccattagatggaagagcaatgaatattcaattagctact
tcggagataagcaactttagaaacgaagaaagaaatcgaatcagtggtggcggaggcaac
actggcggcaatggaccagtcaggagaaatatgaacagaggtggaccaaaccgaaatcaa
ggtggaggtggatcccgtggtaatgctcgccgtcctggccgtggaggagctggagcaggc
cgtgggaagcgtcctgtaccaactgcagaacagttagatgctgaacttgatgcctatgtt
aaagaaattaagtga
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