Spodoptera litura (tobacco cutworm): 111365066
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Entry
111365066 CDS
T08157
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
sliu
Spodoptera litura (tobacco cutworm)
Pathway
sliu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sliu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111365066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sliu03019
]
111365066
Enzymes [BR:
sliu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
111365066
Messenger RNA biogenesis [BR:
sliu03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
111365066
mRNA degradation factors
3'-5' decay
Pan complex
111365066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH_1
PAN2_N
UCH
WD40_CDC20-Fz
PEP5_VPS11_N
Beta-prop_WDR3_1st
WD40_like
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
111365066
NCBI-ProteinID:
XP_022838020
UniProt:
A0A9J7ESV7
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Position
6:complement(9287193..9307718)
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AA seq
990 aa
AA seq
DB search
MEYHYSDLCMPTDHLLTGPYAAEYAPQYLVPKQSAEYEVRSSVLVDGGDRFGVSAVVFDK
YEELIWMGNQGGHVTSYYGPGMQKYTSFQVHESEEVRDIITVEQGIFALTKTTLRHQIRR
GIPKRTFKSPNMTDMQCLFQVSATKLMMGGHQNKLIDLDLNRMSETAIPIQEEGCAVLRS
GGGSLVACGSANGMVALRDIRTPTTAEHTFTAHSACLSDLDMQGDLLITCGFTQSVGMAV
AEPYVLVWDVRCLRGNSKPGEGAWSLPTVSPPLLLHFLPAFSGRAVALSGDGHVALLHVN
APNATEHSVFQVDTQSSQCSVMDVSSTSQALVFGDQSGHLHLFSPQHNHEPVFNNFSRAT
EFADQVLGIPYVGFNDTTFQFSTVPLPPLTSGTKWFNELPEEFFKRIYRKPKQIDPEVLK
SMKMQGPIGYAPNPRSFKRNQMPYIEDNFDDLNSSRQNENKYVAQPIPKHYQKIDIRYNK
HGPNEELEKLNRTGLPGLETTLPNSYCNSMLQVLYYTLPVKATLLAHTCAKEFCLSCELG
FLFRMLDTSGGAPCQANNFLRAFRTVPEAAALGLILPDRGPDSRVDLVALIQSWNRFILH
QIHYEILETRKKEKALLVNSPPKPVRMPAVNVKRPAPQGNQLNGQFSEEYQYTELEFLGP
ATEFEGSEELREEGWTAREDGAGDADSVPVDNHELPTNQQADREESEISQLFAIGRHQLN
RCMKCNKEEGRESVVLACALQYPTAVREGPEPRGGFLELVRASLAARRSTPAWCEHCSRF
TPTVQRGRIVRLPPILAINCGGATVREKAYWAKGVQKEMPEMKRGGGGKPCRYGLHCARP
GCHFKHPERPSPQAGSSKTPAQESNCVLPQQLLIRLQSDGDVVINDKVESPTDPHTPNNR
ADKHKKKNVTTQSEEEYTLSAAVVCIEDNPKNLVAYIQTAGKDVEPVWYLFNDLSIVPVS
ADEVVQFGAWWKTPCVLFYTAAARAPPPRS
NT seq
2973 nt
NT seq
+upstream
nt +downstream
nt
atggaatatcactattccgacctttgtatgccgacggatcatctgctaactggaccatat
gccgcagaatatgctccacaatacttggtaccgaagcaatcagcggaatatgaggtgcgg
tccagtgtacttgtggatgggggagaccggttcggggtgtccgctgtggtgtttgacaag
tatgaagagctgatatggatggggaatcagggaggtcatgtaacatcatactatggacct
ggaatgcaaaagtacacatcttttcaagtacatgagtcggaagaagtgagagatatcata
actgttgaacaaggtatatttgcacttacaaagacaactttaagacatcaaatacgaaga
gggattccgaaacggactttcaaatcacctaatatgacagatatgcaatgcctcttccaa
gtgagtgctactaaattgatgatgggaggacatcagaacaaattaattgacttagatctc
aacagaatgagtgaaactgctattcctatccaagaagaaggttgcgcagtgctgcgtagt
ggcggtggttctttagtggcatgtggtagtgccaatggaatggtcgccttacgggacatt
cggaccccgaccacagccgaacatacctttacagcacactccgcttgcctctcagacttg
gacatgcaaggagatttactcatcacttgtggatttacgcaatccgtgggtatggcagta
gccgagccctatgtgttagtatgggacgttcgttgtctacgtggcaacagtaagccgggt
gaaggtgcctggtcactgcccacagtgtcgccgccattgttactgcacttcctgcccgcg
ttctccggtagagcagtcgcgttgtccggcgacggccatgttgctttgttacatgttaac
gcacctaatgctactgagcattctgtctttcaggtggacactcaaagttcccaatgcagt
gtaatggatgtatcctccacaagtcaagcgctagtgttcggtgatcaatccggacatctt
cacttgttctcccctcaacacaaccatgaaccagtgtttaacaacttttccagagcaaca
gagttcgcggatcaagtgttaggtattccatacgttgggttcaacgacaccacattccaa
ttctccactgttccactacctcccctaacttcgggcaccaaatggttcaacgaattacct
gaagaattcttcaagagaatatacaggaaaccgaaacagatagatccagaagtacttaag
tctatgaaaatgcaggggcctattggatatgcgccgaatcctagatcttttaaaaggaat
cagatgccgtacatagaagataatttcgacgatttgaattcttcgagacagaatgaaaat
aaatatgtcgcgcaacccattcctaagcactatcaaaagatagacatacgctacaacaaa
cacggcccgaacgaggagctagagaagctgaatagaacaggtcttccagggttagagact
acgttacctaactcatattgcaattctatgttgcaggttttatattacacattgccggtt
aaggcgaccctcttagcacatacatgtgccaaagaattttgtctcagttgcgaattgggg
ttccttttcagaatgttagatacgtctggtggtgcgccgtgtcaggctaataacttcctt
cgcgcgttccgtactgtgcctgaagcggccgcgctggggcttatattgcctgatagagga
ccggattccagggtcgatttggttgctttaatacagagttggaatcgcttcattctgcat
cagattcactacgaaatactggaaactcgtaaaaaggagaaagctctattagtgaatagt
ccaccgaaacccgtgcggatgccagctgtgaacgtaaagagacctgctcctcaagggaac
cagctcaatgggcagttttctgaggaatatcagtatacggagctggagttcttgggaccg
gctaccgagtttgagggtagtgaagagctgagggaagaagggtggacagctcgggaggat
ggtgcaggtgatgcagattcagttccagttgataatcatgagctgccaactaaccagcaa
gcagatagagaagagtcagagatatcacaactcttcgccatcgggagacaccagctcaac
cggtgtatgaagtgcaacaaggaggaaggccgggaatccgtagtgttggcctgcgctctc
cagtatcccacagcagtccgggaaggtccggagccccgcggtgggttcttggaactagtt
cgcgcgtcactagcggcgcgacgtagtacgccggcgtggtgcgaacattgttccaggttt
acacctactgtacaacgggggagaatcgttagattgccaccgatactagcaatcaattgc
ggtggtgctacagttcgagagaaggcgtattgggctaaaggagtccagaaagagatgccg
gagatgaagcgaggtggcggtggtaagccgtgtcgatatggactacactgcgctcgacca
ggctgccattttaaacacccagaaaggcctagtccccaagcagggtcatcaaagacacct
gcgcaggaatcaaactgcgttttaccgcaacagctacttataagactgcaatctgatggt
gacgttgtaattaatgataaggtggaatccccaacagacccacacacaccgaacaatagg
gctgacaagcataagaaaaagaatgtaactacacaatccgaagaggaatacaccctgtcc
gcagccgtagtctgtattgaggacaaccctaagaacttggtcgcgtacatacagactgct
gggaaggatgtcgagcctgtttggtacttgttcaacgatttgagtattgtcccagtgagt
gcagacgaggtggtacagttcggcgcgtggtggaagactccgtgcgtgttgttctacaca
gccgccgcgcgcgccccgccgccgcgctcatag
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