KEGG   Shewanella livingstonensis: EGC82_01090
Entry
EGC82_01090       CDS       T05875                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
slj  Shewanella livingstonensis
Pathway
slj03030  DNA replication
slj03430  Mismatch repair
slj03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:slj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EGC82_01090
   03430 Mismatch repair
    EGC82_01090
   03440 Homologous recombination
    EGC82_01090
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:slj03032]
    EGC82_01090
   03400 DNA repair and recombination proteins [BR:slj03400]
    EGC82_01090
Enzymes [BR:slj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     EGC82_01090
DNA replication proteins [BR:slj03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     EGC82_01090
DNA repair and recombination proteins [BR:slj03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     EGC82_01090
SSDB
Motif
Pfam: RNase_T Rv2179c-like RNase_H_2 DNA_pol_A_exo1
Other DBs
NCBI-ProteinID: AZG71485
UniProt: A0A3G8LQH5
LinkDB
Position
complement(242501..243121)
AA seq 206 aa
MIPIFANHIVVLDFETTGLSPDNGDRAIEIGAVKLVNGQIVDTFQELINPGQRVNSFIEQ
YTGISNNMLKHASTSKQVMGQFAQFIDGFNLVAHNASFDKKFLDAEFSHSKLHYSGQFVC
SLLLSRRISQDAPNHKLGTLVDYHQLPNDGVFHRALADATMTSHLWLHQLEILQQQMPKH
PITIDIINKISSLPKAQIARFIRTMS
NT seq 621 nt   +upstreamnt  +downstreamnt
atgatccccatattcgctaatcatattgtggtactcgattttgaaaccacaggactatca
cccgataatggtgaccgagccattgaaattggcgcggtaaaactggtcaatggccaaata
gtcgataccttccaagaattgattaatcctggtcaacgagtcaatagctttattgaacaa
tacaccggtatcagcaacaatatgcttaagcatgcatcaacctctaaacaagtcatgggg
cagtttgctcagtttattgatggctttaatttagtggcacacaatgccagttttgataag
aagtttcttgatgctgaatttagtcatagcaaactgcattacagtggtcagtttgtttgc
tctttattgctatcccgccgcataagtcaggacgcacccaatcataagctaggcacttta
gtcgattatcatcaattgcctaacgatggtgtttttcaccgtgccttagctgacgctacc
atgaccagccacctttggttacatcaactagaaatactgcaacaacaaatgccaaaacac
cctataaccattgatattattaataaaatatctagcctacccaaagctcaaatagcgcgt
tttatacgtactatgagctag

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