Shewanella livingstonensis: EGC82_01130
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Entry
EGC82_01130 CDS
T05875
Symbol
recF
Name
(GenBank) DNA replication/repair protein RecF
KO
K03629
DNA replication and repair protein RecF
Organism
slj
Shewanella livingstonensis
Pathway
slj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EGC82_01130 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slj03400
]
EGC82_01130 (recF)
DNA repair and recombination proteins [BR:
slj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
EGC82_01130 (recF)
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Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_15
AAA_27
AAA_29
AAA_13
AAA_16
ABC_tran
ATPase_2
Motif
Other DBs
NCBI-ProteinID:
AZG71493
UniProt:
A0A3G8LNX2
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Position
249989..251071
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AA seq
360 aa
AA seq
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MSLSRITIGSFRNITSASFQPCDGLNLIYGQNGSGKTSILEAIYFLGMGRSFRSHLSQRV
INHDDDKLTLFAHLTNADRDCKIGLRRHRSGEIEVKIDGEKVKRLSTLAETLPIQVITPE
SFSLLFEGPKARRQFIDWGAFHSDPHFYQAWVNTRKVLKQRNQLLRNQSSYSQIQFWDKE
LVRYAEQVTEIRNQYVDSLNVLLKGIIGVFLPQIDIKVSFTRGWDSKTDFAQLLENQYSR
DLAAGNTGSGPHKADLRLRVGTLPAQDALSRGQLKLLVCALRIAQGKLLKQQLDKNSIYL
VDDLPSELDAQHRQLLLQQLTETGAQIFVTAIDPLAIVDSLSSPPKRMFHVEHGLVTVIE
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgagtttatcgcgtattaccataggttcatttcgtaatattacctctgcgtcatttcag
ccttgtgatggcttaaatttgatttacggtcaaaatggtagtggcaaaaccagtattctt
gaagctatatactttttgggaatgggccgctcgtttcgcagtcatttatcgcaacgagtc
atcaaccatgatgacgataaactgactttatttgctcacttaacgaatgcagacagagat
tgtaaaattggcttacgtcgccatcgaagtggtgagattgaagttaagatcgacggtgaa
aaagtaaagcgcttatcaaccctggccgaaacattacccattcaagttattactccagaa
agtttttctttactgtttgagggacctaaagcacgtcgtcaatttatcgattggggtgct
tttcattctgacccgcacttttatcaagcttgggtgaatacccgtaaggtattaaaacaa
cggaatcagttgcttagaaatcaatcctcctatagtcaaatacagttttgggataaagag
ttggtgcggtatgctgaacaagttaccgagatacgaaatcaatatgtagactcgttaaat
gtgctactaaagggtataatcggagtgtttttacctcagattgatattaaggtttctttt
acccgaggatgggacagtaaaacggattttgcacaattacttgaaaaccaatactcaaga
gatttagctgctggtaatacgggtagtggtccccataaagcagatttacgtttgcgtgtg
ggcactttaccagcacaggatgcattgtcccgtggacaattaaaattattagtctgtgca
ctgcgtattgcacagggaaagttgctcaaacaacagctagataaaaatagtatttatcta
gttgacgatttaccgtcagagttggatgcacagcataggcagctattgcttcagcagtta
accgaaaccggtgcacaaatttttgtcaccgcgatcgatccgctagcaatagtcgattcg
ttatctagccctccgaaaaggatgtttcatgtggaacacgggctggtaacggttattgaa
taa
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