Shewanella livingstonensis: EGC82_01180
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Entry
EGC82_01180 CDS
T05875
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
slj
Shewanella livingstonensis
Pathway
slj00071
Fatty acid degradation
slj00280
Valine, leucine and isoleucine degradation
slj00310
Lysine degradation
slj00362
Benzoate degradation
slj00380
Tryptophan metabolism
slj00410
beta-Alanine metabolism
slj00640
Propanoate metabolism
slj00650
Butanoate metabolism
slj00907
Pinene, camphor and geraniol degradation
slj00930
Caprolactam degradation
slj01100
Metabolic pathways
slj01110
Biosynthesis of secondary metabolites
slj01120
Microbial metabolism in diverse environments
slj01200
Carbon metabolism
slj01212
Fatty acid metabolism
Module
slj_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
EGC82_01180 (fadB)
00650 Butanoate metabolism
EGC82_01180 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
EGC82_01180 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
EGC82_01180 (fadB)
00310 Lysine degradation
EGC82_01180 (fadB)
00380 Tryptophan metabolism
EGC82_01180 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
EGC82_01180 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
EGC82_01180 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
EGC82_01180 (fadB)
00930 Caprolactam degradation
EGC82_01180 (fadB)
Enzymes [BR:
slj01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
EGC82_01180 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
EGC82_01180 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
EGC82_01180 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
EGC82_01180 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
NAD_Gly3P_dh_N
Motif
Other DBs
NCBI-ProteinID:
AZG71503
UniProt:
A0A3G8LNY5
LinkDB
All DBs
Position
complement(264155..266305)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELLEDNIAKLCFNAQGSVNKFDRETIASLDAALDSIKQNTDIKALLLTSA
KSTFIVGADITEFLSLFKQDDATLLAWVEQANAVFNKLEDLPFPTASAINGFALGGGCET
ILATDLRVADTNARIGLPETKLGLIPGFGGTVRLPRVIGADNALEWITTAKDQRPEDALK
VGAIDAVVAPENLEAAAIQMLHDALNGSLDWQARRTKKQSPLQLPKLEAMMSFATAKGMV
FSVAGKHYPAPMAAVNVVEQAAGLDRDGALKVEAQAFIKLAKTDVAQALIGIFLNDQFVK
GKAKKAAKLAHNVNQAAVLGAGIMGGGIAYQSASKGTPIVMKDIAQPALELGLNEAAKIL
TTQVARGRSTPEKMAKVLNNITPSLDYAAIKNSDIVVEAVVEHPKVKATVLAEVEGYVSE
DAIIASNTSTISINLLAKSLKKPERFCGMHFFNPVHKMPLVEIIRGEHSSEETIATVVAY
ASKMGKTPIVVNDCPGFFVNRVLFPYFAGFSGLLAEGADFAAVDKVMEKQFGWPMGPAYL
LDVVGLDTGHHAQAVMAEGFPDRMGKNGKDAIDIMFENKRLGQKNAKGFYAYSVDRRGKP
KKDIDPTSYALLGETFGELKVFESDDIIARCMIPMIIETVRCLEEGIIASPAEGDMGLVY
GIGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDTMRKLAANNGSYYQA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagccctaccattcaggttgagttacttgaagataatattgccaaactg
tgttttaacgcacaaggttcggtaaataagtttgacagagaaactatagcctctctagat
gccgccttagacagcatcaaacaaaacactgatattaaagccttattgctgacgtcagca
aaaagtacttttattgttggcgcagacatcactgaatttctaagcctttttaagcaagac
gatgcaactttgttagcttgggttgaacaagctaatgcggtattcaacaaacttgaagat
ttaccgtttccaacggcatcagccatcaacggttttgctcttggtggtggttgtgagacc
attttagcaaccgacttacgtgttgcagataccaatgctcgcatcggtttaccagaaacc
aaattaggtcttattcctggttttggtggcacagtgcgtttaccgcgtgtgatcggtgca
gataatgcacttgagtggatcactaccgctaaagaccaacgtccagaagatgcactaaaa
gtaggcgcgattgatgccgttgtcgcaccagaaaacttagaagctgctgcgattcaaatg
ttgcatgatgcccttaatggtagccttgattggcaagctcgtcgtaccaaaaagcaatca
ccattacagttaccaaaacttgaagccatgatgtcttttgctaccgctaaaggaatggtg
ttttctgttgcaggcaagcattatccagcgccaatggccgctgtgaatgttgtcgaacag
gctgctggtttggaccgtgatggcgcattaaaagtggaagcacaagctttcatcaaatta
gctaaaacagacgttgcccaagcgctaattggtattttcttaaatgaccagttcgttaaa
ggcaaagcaaagaaagctgctaaattagctcataatgtcaaccaagcagcggtattgggt
gcaggtattatgggcggcggtattgcttaccaaagcgccagcaaaggcacaccaattgtg
atgaaagacatcgctcagccagcattagagctaggcttgaacgaagcggctaaaatcctg
acaacacaagttgctcgtggtcgttctacgccagagaaaatggctaaagtattaaacaac
atcacgccttcactagattatgccgctatcaaaaatagcgatatcgttgtagaagcggtt
gttgaacatccaaaagttaaggctactgtactagctgaagttgaaggttacgtatcagaa
gatgccattattgcgtcaaacacctcgactatctcaatcaacttactggccaaaagtctt
aagaaacctgaacgtttctgcggtatgcacttctttaaccctgtgcacaaaatgccatta
gttgaaattatccgtggtgagcatagctctgaagaaaccatcgcgacggtagtcgcttac
gccagcaaaatgggtaaaaccccaattgtagtgaatgattgcccaggcttcttcgttaac
cgcgtattatttccatactttgccggatttagtggtctactcgcagaaggcgcagatttt
gccgctgtcgataaagtcatggaaaaacagtttggctggccaatgggcccagcttactta
cttgatgtagtcggtttagatactggtcatcacgctcaagcggtaatggctgaaggcttc
cctgatcgtatgggtaaaaatggcaaagacgctatcgacattatgtttgaaaacaagcgt
ctaggtcagaaaaatgctaaaggtttctatgcttattctgttgaccgtcgtggtaagccg
aaaaaagacattgatccaacaagctacgcattattaggcgaaacgttcggcgaactaaaa
gtatttgagtcagatgatatcatcgctcgctgtatgatcccgatgattatcgaaacggtt
cgttgtttagaagaaggcattattgcatcacctgctgaaggcgatatgggtctagtttac
ggtattggtttccctccattccgtggcggtgtattccgttatttagataccatgggcgtg
gcaaactttgttgccctagcagacaaatacgcccatcttggcggcttatatcaagtgacc
gataccatgcgtaaacttgcagccaacaacggtagttactaccaagcctaa
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