Shewanella livingstonensis: EGC82_03170
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Entry
EGC82_03170 CDS
T05875
Name
(GenBank) ribonuclease G
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
slj
Shewanella livingstonensis
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
slj03019
]
EGC82_03170
03009 Ribosome biogenesis [BR:
slj03009
]
EGC82_03170
Messenger RNA biogenesis [BR:
slj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EGC82_03170
Ribosome biogenesis [BR:
slj03009
]
Prokaryotic type
rRNA processing factors
EGC82_03170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
S1
RNase_E_G_Thio
Motif
Other DBs
NCBI-ProteinID:
AZG71849
UniProt:
A0A3G8LQP3
LinkDB
All DBs
Position
702684..704174
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AA seq
496 aa
AA seq
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MNIKAQRKKGTELLINVTPTEARVALVEHGVLQEVHIERRMKRGLVGNIYKGKISRVLPG
MQAAFVDIGLDKAAFLHASDIVPHTECVADVEKGNFVVRDIAELVRQGQDIMVQVVKDPL
GTKGARLTTDITLPSRYLVFMPGSSHVGVSQRIELEEERQRLKNITLPYVDDDGGFIIRT
AAENVGEDELAQDAAFLRRVWAKVSERRKRKGVILLYQDLALPVRIIRDFVGTELDHIQV
DSRRTYAELQQFAQEFMPEIAEKIEHYAGPAPIFELYDVENEVQRALGRKVELKSGGYLI
IDQTEAMTTVDINTGAFVGHRNLEETIFNTNLEATQAIARQLRLRNLGGIIIIDFIDMLS
KEHQARVLESLNAALALDRVKTSVSGFSGLGLVEMTRKRTRESLEHVVCGECPSCKGTGT
MKTIETVSYEIFREIIRLDRAYKADEFLLYCSPTVYMSFSGDESHLLAELEVYIGKRIRL
QNEPLYIQSKYDVVMM
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaacataaaagcacaacgtaaaaaaggcacagaactactcattaatgtcacgccaact
gaagcgcgtgttgcattagtcgagcatggtgttttacaagaagtgcatattgaacgtcgt
atgaagcgaggtttggtcggcaatatttataaaggtaaaattagccgtgtgctccctggc
atgcaagccgcatttgttgatattggcctcgataaagccgctttcttacatgcttccgat
attgttcctcataccgaatgtgttgccgatgttgaaaaaggcaattttgtggtgcgtgat
attgctgagctagtgcgccagggccaagatattatggtacaagtggttaaagacccactc
ggcaccaaaggcgcccgcctaacgaccgacattaccttaccatctcgttacttagtgttt
atgcctggctctagccatgttggcgtatcgcaacgtattgaacttgaagaagagcgccaa
cgccttaaaaatatcaccttaccttatgttgatgatgacggtggctttattatccgcacc
gcagctgaaaatgtcggcgaagatgaactcgctcaagatgcggcattcttacgccgcgta
tgggctaaggtcagcgaaagacgtaagcgtaaaggggttatattactgtatcaagacttg
gcattacctgtacggatcattcgcgattttgttggcactgagctcgatcatattcaagta
gactcacgccgcacgtatgcagaattgcaacaatttgcgcaagaatttatgccggaaatt
gctgaaaagattgagcattatgctggccctgcacctatctttgaattgtacgatgtcgaa
aatgaagttcaacgggctttaggccgtaaagtggagcttaagtctggcggttacttaatt
attgaccaaaccgaagccatgactaccgttgatattaatactggtgcgtttgttggtcat
cgtaatttagaagaaaccatatttaataccaatcttgaagccactcaagccattgccaga
caactgcgtttacgcaatttgggtgggattattattatcgattttattgatatgcttagt
aaggaacaccaagcacgagtgttagaaagcttaaatgcagcattggcattagatcgcgtc
aaaaccagtgtcagtggtttttcgggcttaggtttagtggaaatgacccgtaaacgtact
cgcgaaagtttagagcatgtagtgtgtggtgagtgcccgtcttgcaaaggaactggcacc
atgaaaaccattgaaactgtgtcatatgaaatttttcgagaaattattcgtttagacaga
gcttataaagccgatgagtttttactgtattgctcaccgactgtgtatatgagttttagc
ggtgatgaatcgcacttgctggcagaattagaagtctacattggtaagcgtattcgttta
caaaatgaaccgttatatattcaaagtaaatatgatgtggtgatgatgtag
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