Shewanella livingstonensis: EGC82_03280
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Entry
EGC82_03280 CDS
T05875
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
slj
Shewanella livingstonensis
Pathway
slj03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EGC82_03280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slj03021
]
EGC82_03280
03400 DNA repair and recombination proteins [BR:
slj03400
]
EGC82_03280
Enzymes [BR:
slj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EGC82_03280
Transcription machinery [BR:
slj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EGC82_03280
DNA repair and recombination proteins [BR:
slj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EGC82_03280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
DUF1599
Motif
Other DBs
NCBI-ProteinID:
AZG71868
UniProt:
A0A3G8LSY9
LinkDB
All DBs
Position
complement(735195..735473)
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AA seq
92 aa
AA seq
DB search
MARVTVEDAVNKIGNRFDMILVAARRARQIAVQGKEPMVDEMNDKPTVVALREIELGLVT
SNTLDADERQTVREREAAEIAAVAAIAEGRVL
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgtaactgtagaagacgccgtaaataaaatcggcaaccgttttgatatgatc
ctggttgcagcgcgtcgtgcacgccaaatcgctgtccaaggtaaagaacctatggttgat
gagatgaatgataaaccaacggttgtcgcattgcgtgaaatcgaattaggtttagtcacc
tcaaacactttagatgctgatgagcgccaaactgtccgtgaacgtgaagcagctgaaatt
gccgctgtcgcagccattgcagaaggccgcgttttataa
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