Shewanella livingstonensis: EGC82_05360
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Entry
EGC82_05360 CDS
T05875
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
slj
Shewanella livingstonensis
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slj03009
]
EGC82_05360
Ribosome biogenesis [BR:
slj03009
]
Prokaryotic type
ribosomal protein modification factors
EGC82_05360
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
GNA1162-like
Motif
Other DBs
NCBI-ProteinID:
AZG72246
UniProt:
A0A3G8LRK0
LinkDB
All DBs
Position
1231475..1233676
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AA seq
733 aa
AA seq
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MEIKVNFLDNLRLEAKFDDFTVTADQPIRYKGDGSAPSPFDYFLASSALCAAYFIKVYCK
ARDISTENIKLSQNNIVDPEDRYNQIFQIQVELPDDISDKDRLGILRSIDRCTVKKVVQT
GPEFKVETVAKLDADANAMLMGQPDGDVSTFILGKDLPLEQTIKEMTGLLADLGMKIEIS
SWRNIVPNVWSLHIRDAASPMCFTNGKGATKESALCSALGEFIERLNNNFFYNDQFFGTE
IANSEFVHYPNEKWFALEDDDALPTGILDEYCLDIYNPDEELCGSHLIDTNSGNKDRGIC
TIPYTRQSDGETVYFPSNLIENLFLSNGMSAGNNLQEAHVQCLSEIFERAVKRQIIEQEI
VLPDVPMAVLEKFPSILAGIKGLEEQGFPIVVKDASLGGQFPVMCVTLMNPRTGGVFASF
GAHPSFEVALERSLTELLQGRSFEGLNDVPKPTFNSMAVTEPENFVEHFIDSTGVISWRF
FSSKFDYEFCEWDFSGTSEEEASGLFGILEAMGKEVYIAEFTDLGASACRILVPEYSEVY
PVDDLIWDNTNKSLHYREDILNLHSLSTKALGKLVNRLEESQLDNHTDIRTLIGIVFDEN
TVWGQLTIIELKILIYLALGSHEDAIELVGEFLQFNDNTVQRGLFYQAVNAVLEVTLDED
LELEHFIGNFNRMFGKDVMDNVVGSVNGTVRFYGLSKTSMNLEGIEPHLRLIESYKKLHQ
ARKIKADLSRLDR
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagtaaattttctcgataatttgagactcgaagctaagtttgacgacttt
actgtcactgccgatcaaccgatccgctacaaaggtgatggttctgctcctagccctttt
gattatttcttagcatcttcagcactttgtgccgcttattttattaaggtgtattgtaaa
gcacgtgatatttcgacggaaaatatcaaattgtcgcaaaacaatattgtcgaccctgaa
gatcgttataaccaaatattccaaattcaggttgagttaccagatgatatttctgataaa
gatcgtctaggtattttacgttctattgatcgttgtactgttaaaaaagtcgttcaaaca
ggccctgaatttaaagtcgaaacggttgcaaaactagacgcagacgccaatgccatgttg
atgggtcaacccgacggggatgtaagtacttttattttaggtaaagatttaccgcttgag
caaaccattaaagaaatgacgggcttgttagcggatcttggcatgaagatcgaaatctcg
tcatggcgaaatattgtgccaaacgtgtggtcattacatattcgtgatgcagcatcacca
atgtgttttactaacggtaaaggtgccactaaagagagcgcgttatgttctgctttaggc
gagtttattgaacgtcttaataataactttttctataatgatcaattttttggtactgag
atcgccaatagtgaatttgtgcattacccaaatgagaaatggtttgcactagaagatgat
gatgctctgcctactggcattttagatgaatactgtttagatatttataatccagatgaa
gagttatgtggctcgcatttaattgatactaactcaggcaataaagatcgtggcatttgt
actattccctatacccgtcaatcagatggcgaaacggtctatttcccgtctaacttgatt
gaaaatctatttttaagcaatggcatgagtgcgggtaataacttgcaagaagcccatgtg
cagtgtttatctgaaatttttgaacgtgcagttaaacgccaaattatcgaacaagaaatt
gtactacccgatgtgccaatggccgttctagagaaattcccaagtattttagcgggcatt
aaaggacttgaagagcaaggcttccccattgttgtgaaagacgcttcattaggcggtcaa
ttcccggtgatgtgtgtcaccttaatgaaccctcgtactggtggtgtatttgcctcgttt
ggtgcacatcctagctttgaagtggcattagagcgcagcttaaccgagttattgcaaggt
cgcagctttgaaggcttaaacgatgtgccaaagcctacttttaatagtatggcagtgact
gagccagaaaactttgttgagcactttattgattctactggggttatttcttggcgcttc
tttagcagtaagtttgattatgaattctgtgaatgggactttagcggtaccagtgaagaa
gaagccagcggtttattcggtattttagaggccatgggcaaagaagtgtatattgccgag
tttacagatttaggcgcatctgcgtgtcgtattttagtgcctgaatattcagaagtgtat
cctgtagatgacttgatttgggacaataccaataagtctttacactaccgtgaagatatc
ttaaatctgcattcattaagtactaaagcattaggtaagttagttaatcgcttagaagaa
agtcaattagataaccacactgatatccgtacattaattggcattgtgtttgatgagaac
accgtttggggccagttaaccattatcgaattgaaaattttgatttatctggcgttaggc
tcgcacgaagacgcgattgaattggttggtgagttcttacagtttaacgacaataccgta
caacgaggtctgttttatcaagctgtgaatgcagtattggaagtgactttagatgaagac
ttagaacttgagcactttattggtaactttaaccgcatgttcggtaaagacgttatggac
aatgtggtcggttctgttaatggcacagtacgcttttatggcctgagtaaaaccagcatg
aacttagaaggtattgagcctcatttacgtttgattgaaagctacaagaagctgcaccaa
gcgcgtaaaatcaaagcagatttgtcacgtttagaccgataa
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