Shewanella livingstonensis: EGC82_05610
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Entry
EGC82_05610 CDS
T05875
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
slj
Shewanella livingstonensis
Pathway
slj00630
Glyoxylate and dicarboxylate metabolism
slj00680
Methane metabolism
slj01100
Metabolic pathways
slj01120
Microbial metabolism in diverse environments
slj01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
EGC82_05610
09102 Energy metabolism
00680 Methane metabolism
EGC82_05610
Enzymes [BR:
slj01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
EGC82_05610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Pyr_redox_2
Fer4_20
Molybdop_Fe4S4
Pyr_redox
Pyr_redox_3
Fer2_4
Fer4_7
NAD_binding_8
Fer4
Fer4_6
DAO
Fer4_8
Amino_oxidase
Fer4_21
FAD_oxidored
HI0933_like
NAD_binding_7
Fer4_9
Fer4_10
Fer4_2
FAD_binding_2
Thi4
FAD_binding_3
Fer4_17
Fer4_15
Fer4_18
AlaDh_PNT_C
Fer4_4
Fer4_16
Lys_Orn_oxgnase
ApbA
2-Hacid_dh_C
Motif
Other DBs
NCBI-ProteinID:
AZG72293
UniProt:
A0A3G8LR88
LinkDB
All DBs
Position
complement(1291377..1295579)
Genome browser
AA seq
1400 aa
AA seq
DB search
MIDITIDGISLALPQADNLLKAASNAGINIPSLCDFSHNQAKQHCNLCQVQIKNNDGSLR
CVRACETPLETGLEVITQSSHLSHLRQQALKDILSDHFADCEAPCQTACPAGVDVQSYLY
HIARGDHKEAVKVIKQTLPLPLSIGRVCPAFCEAQCRRALVDEPVAIRQLKRHAADLDLD
DAESYVPPKAPATNKRIAIIGSGPAGLTAGYYLSNNGHDVTIMESAEKAGGWLRYGIPEY
RLPKDILDKEIELLTRNGLKIKTGCELGRDINLHDLVANYDAVCLAIGAQKAVPMNYPGS
DLIGCYLGVDYLRDYCTDKKLITGKKVAVIGGGNTAIDCARTAVRDGADVTLIYRRSRDE
MPAEPYEILEAEEEGVKFHFLTNPIENHSDSQGRVKSVTFAKMALGEPDGSGRRSPKATG
ETFEEAFDTVIPAVSQQVDLAFLDQPENQIDTGQIALTRWHTFLGCEQTMSAGVEKLFVI
GDSRTGPGTAVGAVADGRKAAEAIEGLLTEGLTCHLQQEDFNSRKADKTASLSAKQYPDL
YPETVKRARLKMPELNQLNRVLNFAEVELGFVPDAAMKEAMRCLECACQANTDCKLRDYA
TEYKVDGKTLDQTQARKFKVDNSAPFITFDANRCISCGACVEACHLQSGHNVINFEANSY
QALPDAATTGISRNAPRVGFTASMNDSDCVQCGNCVQVCPTGALVDARDKTQGTDRALTK
TSTVCTYCGVGCRVELHVDQRKNHVMRVTGDTHSLVNEGMLCVKGRSGFDFLNSPKRLTT
PLIRKNGQLQPATWSEAISYIAQQLQPIKDAAGPSKFAALSSAKCTNEENYLMQKFTRSI
MGTNNIDHCARLCHSSSVAGLSDTLGGGAMTNDIPSIKDSDVIFIIGSDTTSAHPIIASH
IKRAVSQHGARLIVADPKKTTIADSAHLYVSHKPGTDVMLLNAIMQQIIINNWQDMHYIN
SRIEDYELLKQEVMKPDYNLVNAALITGVNAEDIAAMAKMIGTANKTALYYAMGITQHTS
GYDNVVSTSNLQLLCGNIGVTGGGLNPLRGQSNVQGACDMGALPNYYPGYQQVDNPLNNV
KFAKAWGNATLNSEIGLAATEIMQAIVKGKLDALYVLGENPVLSDPDQAHVVAALSTIKF
MVVQDIFLTETAQMAHVVLPATAFAEKEGHFTNTERRVQQLRVALTPPGDAIVDWKIIQM
IANSLDANWHYHSTKDIWDEINHVTPQYQGLTWQRLEHKVDGLQWPCFDENHPGTPILHT
ETFLRGKGRMMPVSYRLPAEMPDSEYPLTLSTGRLLEQFHTGTMTRKTPELDIKGSPRVM
ISVFDAEQLGVNNGDMLKLSTRRGSIKIAAFVTKRAQVGVLFLPFHFAEAAANKLTINAL
DPIAKIPEYKVCAVKAEKSL
NT seq
4203 nt
NT seq
+upstream
nt +downstream
nt
atgattgatatcactatcgacggcatatcgctagcgcttccccaagcagacaacttgtta
aaagcggcctctaacgccggtattaatattcccagcttgtgtgacttttcccacaaccag
gccaagcagcactgtaacttatgccaagtacaaatcaaaaataatgatggcagtttacgc
tgtgttcgcgcctgtgaaacaccgcttgaaacgggcttagaggtcattacccaatcaagc
cacttaagccatcttcgtcaacaagcactcaaagatattctaagtgatcactttgctgat
tgtgaagcaccttgccaaaccgcttgtcctgccggcgttgacgtgcaatcgtacctgtat
catatcgctagaggtgatcataaagaagccgtcaaagttatcaaacaaaccttacctttg
cccttgtctataggccgtgtttgcccggctttttgtgaagcccaatgtcgccgcgcactg
gtagatgaacctgtggcgattcgccaattaaaacgtcatgctgctgacctagatttagac
gatgcagagtcttatgttccgccaaaggcaccagccaccaacaagcgcattgccattatc
ggcagtggcccagcaggactcaccgccggttattatttgtctaataatggccacgatgtc
accatcatggaatcggctgaaaaggcaggaggctggttacgttatggtattccagagtac
cgcttacccaaagatattctagataaagaaattgaactgctcacccgtaacggactaaag
attaaaactggatgtgaactaggtcgcgatatcaatcttcacgatttagtcgctaattat
gatgcggtttgcctcgccattggcgcacaaaaagccgtgccaatgaattaccctggcagt
gatttaatcggttgttatttaggtgtggattatttacgtgattattgcaccgacaaaaaa
ctcattacaggcaaaaaagtagccgtgattggtggcggtaatactgcgattgattgcgcc
cgaacggctgtacgcgatggcgccgatgtcaccttaatctatcgccgtagccgtgatgaa
atgccagcagaaccctatgaaatacttgaagccgaagaagaaggggttaagtttcatttt
cttactaatcctatcgaaaaccacagtgatagccaaggccgagttaaatcagtcaccttt
gcgaaaatggcactcggcgagcccgatggatcgggtcgccgctctcccaaagcgaccgga
gaaacctttgaggaagcctttgataccgtaatacccgcagtatctcagcaagtagattta
gcctttttagatcaaccagaaaatcaaatagacacaggccaaatagccctcacccgctgg
cataccttccttggctgcgagcaaaccatgtctgctggggtggaaaaactgtttgttatt
ggtgattctcgcactggcccaggcactgccgttggggctgtggcagacggccgaaaagcc
gctgaagccattgaaggattattaactgaaggcttaacctgtcatttacaacaagaagat
tttaactcaagaaaagccgacaaaaccgcttcattgtctgctaaacaataccctgactta
tatcccgagacagtgaaacgtgcacgcttaaaaatgcctgagttaaatcaattaaatcga
gtgcttaactttgccgaagtggaactgggctttgttcccgacgccgcaatgaaagaagcc
atgcgctgtttagaatgtgcatgccaagccaatactgattgtaagttacgcgattatgcc
accgaatataaagttgacggcaaaacactggatcaaactcaggcgcgtaaatttaaagtc
gataacagtgcaccttttattacctttgatgccaatcgttgtatcagctgcggtgcgtgt
gttgaagcctgccatctacaaagtggccataacgttattaactttgaagccaatagctat
caagcgctacccgatgctgctacaacaggcattagccgcaacgcccctcgtgttggcttt
actgcgtcgatgaatgacagcgattgtgtgcaatgtggcaactgcgtgcaagtttgccct
actggcgctttggttgatgcccgcgataaaacccaaggcacggatagagcgttaactaaa
acctccaccgtgtgcacatattgtggcgtcggttgccgggttgagttgcatgtagaccaa
agaaaaaatcacgttatgcgtgtcaccggtgacactcactcgctggtaaatgagggcatg
ttgtgtgtaaaagggcgctctggttttgactttttaaacagtcctaaacgccttaccacg
ccattaatacgcaaaaatggtcaactgcaacccgccacttggagcgaggctattagctat
attgctcagcaactacaaccgattaaagatgccgctgggccaagcaagtttgcggcattg
tcttctgctaaatgcaccaatgaagaaaactatttaatgcaaaagttcacccgtagcatt
atgggcaccaacaacattgatcactgcgcacgattatgtcattcatcgtctgtcgcaggg
ctatccgatacccttggcggcggggctatgactaatgatattcccagcattaaagactca
gatgtgatttttatcatcggctcagataccaccagcgcccaccctattatcgcctcgcat
attaaacgagccgttagccaacacggcgcacgcttaattgtcgccgatccaaagaaaacc
actatcgcagatagtgcccatttatatgtatcacataaacctggcacagatgtgatgttg
cttaatgccatcatgcagcaaattatcatcaataactggcaagacatgcactacatcaat
agccgtattgaagactatgaattgctcaagcaagaagtgatgaagcctgattacaactta
gtcaatgcagcattaattactggtgtaaatgccgaagacattgccgctatggctaaaatg
attggcacagcaaacaaaaccgccttgtattatgccatgggaattactcaacatacctca
ggttacgacaatgtagtgtccacctctaacctgcaattactgtgtggcaacataggtgta
acgggtggtggactcaatccattgcgcggccaaagtaatgttcaaggtgcctgtgatatg
ggcgcgctacctaattattatccgggttatcagcaagtcgataacccactcaataacgtt
aaatttgccaaagcttggggcaacgctacgcttaactcagagataggattagcagcaact
gaaatcatgcaggctattgttaaaggcaagctcgatgctttgtatgtattgggtgaaaat
ccagtgctaagcgatccggaccaagctcatgtggttgcggcgctgtctacaatcaagttt
atggtagtgcaagatatctttttaaccgaaacagcccaaatggcccacgtggtattacct
gcgaccgcctttgctgaaaaagagggtcatttcactaataccgaacgtcgggtacaacaa
ttacgtgtcgcgttaacccctccgggggatgcgattgtagactggaaaattatccaaatg
attgccaacagccttgatgctaattggcattaccacagcaccaaagatatttgggatgaa
attaaccacgtcaccccgcaatatcaaggtctgacttggcaacggcttgaacacaaagta
gatggtttacaatggccatgctttgatgaaaaccatcctggcacaccgattttgcatacc
gaaacatttttacgcggtaaaggcagaatgatgcccgtgagttatcgactacctgctgaa
atgcccgatagcgaatatcctttaaccctttcaacaggtcgtttactggaacagtttcat
actggcaccatgacgcgcaaaaccccggaactggatattaaaggctcgcccagagtaatg
atttcggtttttgatgcagagcaattgggcgtcaataacggtgatatgttgaaactgagt
actcgccgcggaagtattaaaatagccgcctttgtgactaagcgggctcaggtaggcgta
ttatttttaccattccactttgccgaagccgcagccaataagctgaccattaatgcattg
gatcccattgcaaaaattccagaatataaggtgtgtgctgttaaagcagaaaagtcactg
tag
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