Shewanella livingstonensis: EGC82_06245
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Entry
EGC82_06245 CDS
T05875
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
slj
Shewanella livingstonensis
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
slj03009
]
EGC82_06245
Enzymes [BR:
slj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
EGC82_06245
Ribosome biogenesis [BR:
slj03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
EGC82_06245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
SYY_C-terminal
S4
Motif
Other DBs
NCBI-ProteinID:
AZG72409
UniProt:
A0A3G8LS80
LinkDB
All DBs
Position
1442402..1443115
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AA seq
237 aa
AA seq
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MVSKRGRIDQFIAGTLQVSKKAVRELLITNKVLVDGQFAKSPDLQINEFSHIECNGVVLR
HYQKQYYMLNKPDGVVSATIDDKHPTALGLMIGVNTDMLHIAGRLDLHSTGLLLLTNDAR
WSEALMAPEHKVDKKYLVTLANPLDQQYVEAFANGMYFEYENITTLPAQLTVLSSHLARV
VLREGKYHQVKRMFGRFRNPVLALHRESVGEIMLDNQLTPGEFRSLTKAEVDSVFQH
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atggtgtctaaacgaggtcgaattgatcaatttattgctggcacattacaggtctcgaaa
aaagccgtgcgtgaattgttaatcaccaataaagtgctggtcgatggccagtttgctaag
tcaccagacttacaaataaatgagtttagccatattgagtgtaatggtgtggtactgcgc
cattatcaaaagcaatactatatgcttaataaacctgacggtgtggtaagtgcaacgatt
gatgataaacatccaacagcattaggtttaatgatcggtgttaatacagatatgctgcat
attgctggtcgattagatttacattctaccgggttattgttgttaactaatgatgctaga
tggtcagaggctttgatggcaccagagcataaagtcgataaaaaatacctagtgacttta
gctaatccgctcgatcaacaatacgtcgaagcttttgctaatggaatgtattttgaatat
gaaaatattactaccttaccggcacaactcactgttttatcaagtcacctagctagagtg
gtgttgcgtgaaggcaagtatcatcaagttaagcgtatgtttggtcgttttcgtaatccg
gtgcttgcgctgcatcgagaatcagttggtgagatcatgcttgataaccagttaaccccg
ggtgaatttcgttcattaacaaaagctgaagttgatagcgtttttcagcactag
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