Shewanella livingstonensis: EGC82_06655
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Entry
EGC82_06655 CDS
T05875
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
slj
Shewanella livingstonensis
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
slj03016
]
EGC82_06655 (truB)
Enzymes [BR:
slj01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EGC82_06655 (truB)
Transfer RNA biogenesis [BR:
slj03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EGC82_06655 (truB)
Prokaryotic type
EGC82_06655 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AZG72482
UniProt:
A0A3G8LU95
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All DBs
Position
1531407..1532360
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AA seq
317 aa
AA seq
DB search
MARRPKGRFIDGIVLLDKDTGMSSNFALQRVKRFFNANKAGHTGALDPLATGMLPICLGE
ATKFSQHLLDSDKRYLVTAKLGERTDTSDSDGEVVQTRAINFSQAELDEKLAFFRGTTQQ
VPSMYSALKYQGQPLYKYAREGIEVPRESRPITVFELNFIKLEGDELTLDIHCSKGTYIR
TIIDDLGEMLGCGAHVIMLRRTQVAEYPYDKMVSLAQLEALLEQAHRQDVAPQTLMDSLL
LPMDTAVAKFAEINLPDEMLYYVMQGQAIQAAGLKPDELVRITIGDERRFVGMGIMNDDG
LLAPKRLIVIHDNVPAE
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atggctcgtcgccctaaaggtcgcttcatcgacggaatcgtattactcgataaagatact
ggcatgagctctaactttgcattgcaaagagttaagcgcttttttaatgccaataaagct
ggccacacaggtgctttagacccgttagcaacaggtatgttgcctatatgcctcggagaa
gcaactaagttctctcagcatttattagattctgataagcgctatctggtcacagctaaa
ttgggtgagcgaacggatactagcgattctgatggggaagtcgtacagacacgtgctatt
aatttctctcaagcagaacttgacgagaagcttgcgttttttcgtggtaccactcaacaa
gttccgtcaatgtattcggcattaaaataccaaggccaacctttgtataagtatgcccgc
gaaggtatcgaagtgcctcgtgagtcacgacctatcactgtatttgagctaaattttatt
aagcttgaaggtgatgagttaaccctagatatacattgctctaaagggacttacatacgc
actattattgatgatttaggtgaaatgcttggatgtggagcgcatgtcattatgctccgc
cgcactcaagttgccgaatatccgtatgataaaatggtgagcctagcacaattagaagcg
ctacttgagcaagctcatagacaagatgttgcacctcagaccctgatggattcattacta
ttaccaatggatactgccgtggctaaatttgctgaaattaacttgccagacgaaatgtta
tattacgtcatgcaaggacaagcaattcaagcggctggacttaagcccgatgagttagtg
cgcatcacgatcggcgatgaacgccggtttgttggtatgggtatcatgaatgacgatggt
ttattagcgccaaaacgtttgatcgtgatccatgacaatgttcctgcagagtag
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