Shewanella livingstonensis: EGC82_06840
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Entry
EGC82_06840 CDS
T05875
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
slj
Shewanella livingstonensis
Pathway
slj00260
Glycine, serine and threonine metabolism
slj00460
Cyanoamino acid metabolism
slj00630
Glyoxylate and dicarboxylate metabolism
slj00670
One carbon pool by folate
slj00680
Methane metabolism
slj01100
Metabolic pathways
slj01110
Biosynthesis of secondary metabolites
slj01120
Microbial metabolism in diverse environments
slj01200
Carbon metabolism
slj01230
Biosynthesis of amino acids
slj01240
Biosynthesis of cofactors
slj04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
EGC82_06840
09102 Energy metabolism
00680 Methane metabolism
EGC82_06840
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EGC82_06840
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
EGC82_06840
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
EGC82_06840
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
EGC82_06840
Enzymes [BR:
slj01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
EGC82_06840
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
OKR_DC_1
Motif
Other DBs
NCBI-ProteinID:
AZG72518
UniProt:
A0A3G8LUZ9
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Position
1582053..1583306
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AA seq
417 aa
AA seq
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MLKKAMNIADYDPELFKAIEDETCRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVETLAIERAKELFGATYANVQPHSGSQANSAVFMALLQPGDTVLGMN
LAHGGHLTHGSPVNFSGKLYNIIPYGIDEAGKIDYDEMERLAIEHKPKMMIGGFSAFSGI
VDWAKMREIADKIGAYLFVDMAHVAGLIAAGVYPTPVPHAHVVTSTTHKTLAGPRGGIII
SAADDEDLYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKVYQQQVVKNAKAMVE
VFLARGYKIVSGGTENHLMLVDLIGRDLTGKEADAALGSANITVNKNSVPNDPRSPFVTS
GVRIGTPAITRRGFKEAEAKELTGWICDILDDASNTAVAERVKAQVLALCARFPVYG
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttgaagaaagcgatgaatattgcggattacgatccagaactatttaaagccattgaa
gatgaaacttgtcgtcaagaagaacacattgaattgattgcatctgaaaactataccagt
ccacgtgtgatggaagcgcaaggttctcagttaaccaacaagtatgctgaaggttatcca
ggtaagcgttactatggtgggtgcgaatacgttgatgtcgttgaaacattagcgatagaa
cgcgcaaaagaattattcggtgccacttacgctaatgtgcagcctcactcaggctcgcaa
gcaaacagcgcagtgtttatggcgttgttacagccaggtgatactgttttagggatgaac
cttgctcatggtggtcatttgacccacggttcacctgttaatttttctggcaagttatac
aacattattccttacggtatcgatgaagctggcaaaattgactatgacgaaatggagcgt
ttagccattgagcataagcctaagatgatgattggtggtttctcggcgttttcaggtatt
gttgactgggctaaaatgcgtgagattgctgacaaaattggtgcttacctgtttgttgat
atggcccacgttgcaggcttaattgctgctggtgtttacccaacgccagtacctcatgct
cacgtcgttacctcaacgacccataaaacattagcgggcccacgtggcggaattattatt
tctgctgccgatgatgaagacttatataagaagttaaactcagcggtattcccgggtggt
cagggtggtcctttaatgcatgtcatcgcaggtaaagcggtagcatttaaagaggcatta
gagccagaatttaaagtatatcaacaacaagttgttaaaaatgctaaagccatggttgaa
gtgtttttagcccgcggttataaaatcgtttctggcggtactgaaaaccatttaatgttg
gttgatttaattggccgtgatttaacgggtaaagaagccgatgccgcattaggcagcgca
aacattactgttaacaaaaactctgtgccaaacgatcctcgctcaccgtttgtgacctct
ggtgttcgtattggtacccctgcgattactcgtcgtggctttaaagaagctgaagcgaaa
gagttaaccggttggatttgcgatattcttgatgatgcctctaatactgcagtggctgag
cgagtaaaagcccaagtgttggcattatgtgctcgattccctgtctacggttaa
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