Shewanella livingstonensis: EGC82_07760
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Entry
EGC82_07760 CDS
T05875
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
slj
Shewanella livingstonensis
Pathway
slj02020
Two-component system
slj02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EGC82_07760
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EGC82_07760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
slj03021
]
EGC82_07760
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
slj02035
]
EGC82_07760
Transcription machinery [BR:
slj03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EGC82_07760
Bacterial motility proteins [BR:
slj02035
]
Flagellar system
Flagellar assembly proteins
Stator
EGC82_07760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_10
UPF0122
HTH_23
Packaging_FI
GerE
Pterin_bind
Motif
Other DBs
NCBI-ProteinID:
AZG72677
UniProt:
A0A3G8LT90
LinkDB
All DBs
Position
1784882..1785601
Genome browser
AA seq
239 aa
AA seq
DB search
MNKAAAYTQFDNKTSIVEQYAPLVKRIAHHMLARLPASVQLDDLLQAGMMGLLEASSKFD
NSKGAKFETFAGIRIRGAMIDEIRRGDWVPRSVHRNNRRVAQVIDELGQQFGRDANDTEI
AEKLDMSLDEYHHILNDVSVGKIIGIEDLGVSQDVLITDNETPDEAFDSLAEIQFQSALV
EAIKTLPERDALVLSLYYDEALNLKEIGAILEVSESRVSQILSQAMLRLKAKLKHWTQE
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
gtgaataaagccgcagcgtatactcaattcgataacaaaacgtctattgttgaacagtat
gcaccgttggtaaaaagaattgctcatcatatgctggcaagattacctgcatcggtgcaa
cttgatgatttattacaagctggaatgatggggttacttgaggcttcatctaaatttgat
aacagcaaaggggctaagtttgaaacctttgctggtattaggatccgtggtgctatgatc
gacgaaattcgacgtggtgattgggttcctcgttctgttcatcgcaataatcgtcgtgtc
gcacaagtgattgatgaattagggcagcaatttgggcgtgatgctaatgatacagaaatt
gctgaaaagcttgatatgtcactcgatgagtaccatcatatattaaatgatgtttctgtg
ggtaaaatcataggcatagaagatcttggtgtttcgcaagatgtgttaatcacagataat
gaaacaccagatgaggcctttgactcacttgctgaaattcaattccaatctgcattggtt
gaagcaattaagacattgccagaaagagatgcgctagtgttgtcgttatattacgatgag
gcgctaaatttaaaagaaatcggtgccatccttgaagttagtgaatcgcgagttagccag
atattaagtcaggcaatgctcagattaaaagcgaaactcaagcattggacacaagaataa
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