Shewanella livingstonensis: EGC82_08830
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Entry
EGC82_08830 CDS
T05875
Name
(GenBank) hypothetical protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
slj
Shewanella livingstonensis
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
slj03400
]
EGC82_08830
DNA repair and recombination proteins [BR:
slj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EGC82_08830
Archaeal homologous recombinant proteins
EGC82_08830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AZG72863
UniProt:
A0A3G8LSV7
LinkDB
All DBs
Position
2048921..2052619
Genome browser
AA seq
1232 aa
AA seq
DB search
MKILSLRFKNINSLKNEWKIDFTQSPFAENGLFAITGPTGSGKTTILDAICLALYHRTPR
LSNISKTTNELMTRGTAECLAEVEFEVKGVAYRAFWSQRRSRDKADGNLQDAQVELAQLS
DGKILATQIKRKTELIEDITGLDFARFTKSMMLSQGQFAAFLNADANDRAELLEELTGTE
IYGLISERVHQHFSEAKTNLKLLEAKLGSVELLDDQQRECQQQQIEQLHLSLTHDQQQLA
QLSQFITWADNSQQAQQLFAKASDEQQHALSRQQQHSDELIQLEHSEPAQQIQPLFEQQQ
KAQQKNQMLTAQVSQLSQQASQAEIALQTQLHQQSQSQQHVEQTNQAHNTLLKLIDQQVL
PLDQHIHQLSYQLAQVKLTQQQTEQQQQKATDQQQQLLSQQQSLSSAKQQIQQQLDDLPQ
GQDVAKKFAAWQTQYHQAIQLNQQLNQNHNLITQQQQNIKQTQAGLTLLTPQITQAQAAL
TQATSQQTESEHAVTVLLAGQDELQINAEYKKLLDQQAGRYQLNQLFSLYSRQQQQCQQL
TSESAQFEIELQALAQSLSAVRANWSDKNQQVKDVQTILQQEQQIANLTLERAKLKAGEP
CALCGSTEHPLVERYEALNVSATEQRAHQLQAELDAIKQQGELLKNQQTVLQVNLNNSLK
QLSQAETDLHTTQQQWQQQTQALVIDLPLDLQQQHGLTDYIAQAEAQQQQLSTLISLLSQ
SQKNLHQQQQLFVQAEQAVAKLINQQELQQQQLANLQQGLVSQQQQTETVTEQHNQLIDV
LETQITTTGLTPPAIEHAVVWLAQRQEQLELWTQAQQQAVDNQQQLSITNEKITANQHQL
ADLGHQCALINEQVDKAQGQLNIVQAQRHDLFADKVIDDEKQLSQHNLVLAQQAYLLVQQ
QLQDADKLLAGMQVQQQSAMAQATETKQELQQLQAQWQTALQASPFSDQQGFEQALLTPQ
QRLVLQQLKQQIDNDIVKANAIAEQALARQTELTQFGQQQGYDVAQHSDILQQHQTTEAK
HQQNKQIVWRLNLELEQDASKREGQQQLLAEQTQMQQDYDDIAYLHSLIGSQKGDKFRKF
AQGLTLDHLVALANRQLERLQGRYLLERKESDALELQVLDTWQGDAVRDTRTLSGGESFL
VSLALALALSDLVSHKTSIDSLFLDEGFGTLDSQTLDTALDALDNLNASGKMIGVISHIE
AMKERIDVQIKVNKMNGLGISKLQSEFAVSGS
NT seq
3699 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattttaagccttcgctttaaaaacattaactcgcttaaaaatgagtggaaaatc
gattttactcaatctccttttgccgaaaatggtttatttgctattactggtcctacaggt
tccggtaaaaccaccatactcgatgcgatttgcctcgcgctttatcaccgcacaccgcga
ttaagtaatatctctaaaaccactaatgagttaatgacccgcggcaccgctgagtgttta
gccgaagtcgaatttgaagtcaaaggtgtggcctatcgtgccttttggagccagcgccgc
tcacgtgataaagccgatggtaacttgcaagatgcacaggtggaattggcacaactgagt
gacggtaaaatccttgccacgcagattaaacgtaaaaccgagttgattgaagatattacc
ggacttgattttgctcgttttactaaatcgatgatgttgtctcaagggcagtttgctgca
ttcttgaatgctgatgctaatgaccgcgctgaattattagaagagctcactggcaccgaa
atttatggattgatttcagagcgggttcatcaacactttagtgaagccaaaacaaattta
aaactgctcgaggcaaaacttggcagtgttgaactccttgatgatcagcaacgcgaatgt
cagcagcaacagattgagcaacttcatctaagtttgacgcatgatcagcaacagctagca
caactaagccaatttattacctgggcagataacagccaacaagcacaacagttattcgct
aaggccagtgacgagcagcagcatgcattatctcgccagcagcaacatagtgatgaatta
atccagctagagcacagtgaacccgcgcagcagatacagcctttatttgaacaacaacaa
aaagctcagcaaaaaaatcaaatgctaaccgcgcaggttagtcagctaagtcagcaagcc
agccaggcagaaattgcactgcaaactcagctgcatcaacaaagccaaagtcagcaacat
gttgagcaaactaaccaagcgcataacacactactcaagctaattgaccagcaagtgcta
ccgttagatcaacatatacaccagttgagctatcaattagctcaagtcaaattaacccaa
caacaaactgagcaacagcaacaaaaagcgacagatcaacaacagcagttattgagccaa
caacaaagcttaagttccgctaaacaacaaatccagcaacagctcgatgatttgccgcaa
ggccaagatgtggctaaaaagtttgctgcttggcaaacccaatatcatcaggcgatacaa
ctcaaccagcagctcaaccaaaatcataatctcattactcaacagcaacaaaatattaag
caaacccaagctggattaactctgctaacaccgcaaatcacacaagctcaagcggcatta
acgcaggcgacaagccagcaaactgagagtgaacacgcggtaacggtattattggccggc
caagatgagttacagataaatgctgaatataaaaagttgctcgaccaacaagcagggcgc
tatcaattaaaccaattatttagcctatacagccgccaacaacagcaatgtcagcagtta
accagtgaatcggcgcaatttgagattgagttacaggcactagcacagtcacttagcgcg
gtgagagccaactggagtgataaaaaccagcaggttaaagatgtccaaacgattttgcaa
caagagcagcaaattgctaatttaaccttagagcgcgctaaactcaaagccggagagcct
tgtgctttgtgcggttcaaccgagcatccattagtagaacgttacgaagcactcaatgtg
tctgcgacagagcagcgagcacaccagttacaagctgaacttgatgcgattaaacaacaa
ggtgaactgcttaaaaatcagcaaactgtgttgcaagtgaatctcaacaactcacttaag
cagctaagccaggctgaaactgatctgcacacaacacagcaacagtggcaacagcagact
caagctttggttattgatctgccattggacttacagcaacaacatggcttaaccgattat
attgctcaagctgaagctcagcagcagcaattatcaacactcataagcctgctgagtcaa
agccaaaaaaatctacatcaacaacaacagttatttgtccaagcggagcaggctgtagca
aaactgattaaccaacaagagttacaacaacaacaacttgcgaacttacagcaggggtta
gtcagtcagcagcagcaaacagagaccgttacagagcagcataatcagttaatcgatgta
cttgaaacacaaattactaccacaggattaactccaccggcaattgaacatgctgtggtc
tggttagcgcagcgacaagagcagcttgagttgtggactcaggcgcaacagcaggctgtc
gataatcaacagcaattgagtattaccaatgaaaaaatcaccgccaaccagcatcagcta
gcagacttgggtcaccaatgcgcgttaatcaacgagcaagtcgataaagcgcaagggcag
ctcaatattgtacaagcccaacggcatgacctgtttgcagataaagtgattgatgatgaa
aaacaactgagccaacacaatttagtgctggctcagcaagcgtatttgttggtgcaacaa
caattacaagacgcagacaagttacttgcggggatgcaagtacaacaacaatctgccatg
gctcaagcgactgaaaccaaacaagaactacagcaattacaagcacaatggcaaactgca
ttgcaagccagtccatttagcgaccaacaagggtttgagcaagcgttattaacgccacaa
cagaggcttgtactacagcaattaaagcagcaaattgataacgatatcgttaaagctaac
gccatagcggaacaagcattagcgcgccaaacggaacttactcagtttggccagcaacaa
ggatacgatgttgcacagcacagtgacatattgcagcagcatcaaacgacagaagctaag
catcagcaaaacaagcaaatagtgtggcgcttaaacctcgagttagagcaagatgccagc
aagcgagaagggcagcagcaactgttagccgaacaaacgcaaatgcagcaagattatgat
gatatagcctacttacattcgttaataggctcacaaaaaggtgataagtttcgtaaattt
gcccaaggactcactttagaccatttagtggcattggctaatcggcagcttgaacgcctc
caaggtcgttacttattagaacgcaaagagtctgatgcactagaactgcaagtgctcgac
acttggcaaggtgacgcagtgcgggatactcgtaccttatctggtggcgagagcttttta
gtaagcctagcccttgcgctagcactatctgatcttgttagtcataaaacgagcattgac
tcactgtttttagatgagggctttggtaccttggatagtcaaacactcgataccgcgtta
gatgcgttagataatttaaatgcatcgggcaaaatgattggcgtaattagtcatattgaa
gccatgaaagagcggatagatgtgcagattaaagtgaataaaatgaatggccttggcatt
agcaaattacaaagtgaatttgcagttagtgggtcttga
DBGET
integrated database retrieval system
