Shewanella livingstonensis: EGC82_09120
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Entry
EGC82_09120 CDS
T05875
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
slj
Shewanella livingstonensis
Pathway
slj03030
DNA replication
slj03430
Mismatch repair
slj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EGC82_09120
03430 Mismatch repair
EGC82_09120
03440 Homologous recombination
EGC82_09120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slj03032
]
EGC82_09120
03400 DNA repair and recombination proteins [BR:
slj03400
]
EGC82_09120
Enzymes [BR:
slj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EGC82_09120
DNA replication proteins [BR:
slj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EGC82_09120
DNA repair and recombination proteins [BR:
slj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EGC82_09120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AZG72911
UniProt:
A0A3G8LTL2
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All DBs
Position
2117827..2118516
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AA seq
229 aa
AA seq
DB search
MVNLWWVKTVLWRKRMVSLPSPLDAYLEAISTALTKPFLDAPLMAIDLEMTGLDPFHDQV
ISIGIVPITKGVIPLEKAQHVMIAISGSVGHSATVHGIVDNQLYMALSLQEAMTWFLAQT
KGYILVAHHAPLDIEFIQQQLVRCFGQSIPLVFIDTLAIEKKRCLMQQSILKEGSLRLGA
SRERYRLPVYSAHNALIDALSCAELLLAQVAAMGDIKTLSVKDLINVFR
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtggtcaatctgtggtgggtaaaaaccgtgttgtggcgtaaaagaatggtctcgttacct
tcgccactagatgcttacttagaagctatctctactgcgctaaccaaaccatttctcgat
gcaccactaatggcaattgatcttgaaatgacggggctagatccctttcatgatcaagtc
atcagcatcggtattgtgcctattaccaaaggggttattccgcttgaaaaagcacaacat
gtcatgattgccataagtggcagtgttggtcatagtgcgacggttcacggtattgtagac
aatcaattgtatatggccttatcccttcaagaagctatgacgtggtttttggcacaaact
aaaggttatattttggtggcgcatcacgcaccgttagatatcgagtttattcaacagcaa
ttagtacgctgttttggtcaatctatcccgttagtgtttattgatacgctagcaatagag
aagaaacgctgtttaatgcaacaatctatattaaaagaaggttcgctacgcttaggtgcg
agtcgtgaacgttaccgtttacccgtttattcagcccacaatgcacttatagatgcatta
tcttgtgcagaattattattggctcaggtggcggctatgggcgacattaaaacattgtcg
gtaaaagacttgatcaatgtatttcgctag
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