Shewanella livingstonensis: EGC82_09940
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Entry
EGC82_09940 CDS
T05875
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
slj
Shewanella livingstonensis
Pathway
slj03030
DNA replication
slj03430
Mismatch repair
slj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
slj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EGC82_09940 (holB)
03430 Mismatch repair
EGC82_09940 (holB)
03440 Homologous recombination
EGC82_09940 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
slj03032
]
EGC82_09940 (holB)
03400 DNA repair and recombination proteins [BR:
slj03400
]
EGC82_09940 (holB)
Enzymes [BR:
slj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EGC82_09940 (holB)
DNA replication proteins [BR:
slj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EGC82_09940 (holB)
DNA repair and recombination proteins [BR:
slj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EGC82_09940 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DUF6276
Motif
Other DBs
NCBI-ProteinID:
AZG73054
UniProt:
A0A3G8LUI6
LinkDB
All DBs
Position
2291958..2292941
Genome browser
AA seq
327 aa
AA seq
DB search
MSDYQIDQLPWLADPHQRFVDQHYRGKSSHAHLFNIDQALGGDKLAKACAHTVLCQQLTP
VGACGQCKSCLLLAAGNHPDLYIIEPDGNQIKVDQIRQLCQALTQTAQQGGARVAVLVNA
ERLNLAAANALLKTLEEPGEDVVLILQTNTSAQLLATITSRCQVLNFVEPTKLAIHHWLA
EQQLLPAANAEGKTHDVTWCLSVVGGPLALASSLRGQHYQQLLIFRQDWAQSLKTGHLSN
SLLKVSEQQIVDALNVLYLYLRQYVLKSSKIKAHPAGRQSLNPLVQAKVIELAGRVMRMC
HKLETMPSVNPQALCQQYVLAFRQLTN
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattatcagattgaccaattaccttggctagccgatccacatcaacgttttgtt
gatcaacattatcgtggaaaaagcagccatgctcatttgttcaatattgatcaagcgtta
gggggtgataagctcgctaaggcttgtgctcatactgtgctttgccaacaacttacccca
gtaggtgcttgcggccaatgtaaaagttgtttgttattagctgccggtaaccatcctgat
ttatatattattgaaccagatggcaaccaaattaaagtcgatcaaattcgtcagctctgc
caagcattaacccaaacagctcaacaaggtggtgcgcgcgtagcggtactcgttaacgcc
gagcgactaaatttagccgcggccaatgcattactgaaaacccttgaagaacctggtgaa
gatgttgtgcttattttgcaaacaaacacatctgcccagttattagccactattacgagt
cgctgccaagtactgaattttgttgaacccaccaagttagctatccatcactggttagct
gagcagcagttgttacccgcagccaatgcagagggtaaaactcacgatgtgacttggtgt
cttagtgttgttggtgggccactcgcgttagcgagtagtttacgcggtcagcattatcaa
caactactgatatttcgccaagattgggctcaaagtttaaaaaccggtcatttaagcaat
agtttattgaaggtgtctgagcaacaaattgttgatgcacttaatgttttgtatttgtac
ttacgccaatatgtgttaaaaagtagtaagataaaagctcatcctgctggccgtcagtcg
ttaaatccactggttcaagctaaagtgattgagcttgctgggagagtaatgaggatgtgc
cataagcttgaaacgatgccaagcgtcaatccccaagcattatgccagcaatatgtactc
gcatttaggcagttaactaattaa
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